RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 PCDHGB4Q9UN71 923 aa8.42□□□□□ -1.06
GGPS1-204ENST00000471812 ZNF175Q9Y473 711 aa8.42□□□□□ -1.06
GGPS1-204ENST00000471812 DSCAMO60469 2012 aa8.42□□□□□ -1.06
GGPS1-204ENST00000471812 ARID1AO14497 2285 aa8.42□□□□□ -1.06
GGPS1-204ENST00000471812 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 TRBV5-3A0A0A0MS03 114 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ZC3H12DA2A288 527 aaKnown RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 FAM234BA2RU67 622 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 A6NNC1 897 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 SLCO1B7G3V0H7 640 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ETV2O00321 342 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 RFXANKO14593 260 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 BCHEP06276 602 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 THBDP07204 575 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 LOXP28300 417 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 DNAJA1P31689 397 aaKnown RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 CPA2P48052 419 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 HOXC5Q00444 222 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 MERTKQ12866 999 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 GSTA3Q16772 222 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 EXOC3L2Q2M3D2 409 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 AGKQ53H12 422 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 C6orf10Q5SRN2 563 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 MRPL2Q5T653 305 aaKnown RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 PLEKHM3Q6ZWE6 761 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 MTERF4Q7Z6M4 381 aaKnown RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 CDC20BQ86Y33 519 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 MISPQ8IVT2 679 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 MIER2Q8N344 545 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 CLIP4Q8N3C7 705 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 SLC38A5Q8WUX1 472 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ZC3HAV1LQ96H79 300 aaKnown RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 TMEM19Q96HH6 336 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ARL5BQ96KC2 179 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ZNF300Q96RE9 604 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 ZBTB18Q99592 522 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 CCDC106Q9BWC9 280 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 HOXD1Q9GZZ0 328 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 TPT1P8Q9HAU6 139 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 RASSF1Q9NS23 344 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 EXD2Q9NVH0 621 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 CCDC167Q9P0B6 97 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 VAPAQ9P0L0 249 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 C6orf203Q9P0P8 240 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-204ENST00000471812 PLEKHA6Q9Y2H5 1048 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 PLCE1Q9P212 2302 aa8.41□□□□□ -1.06
GGPS1-204ENST00000471812 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TMEM72A0PK05 275 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TUBAL3A6NHL2 446 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 AGAP5A6NIR3 686 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 DUXAA6NLW8 204 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 DEFB108AA8MXU0 73 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 HMGB1P1B2RPK0 211 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 MSTNO14793 375 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 SMAD9O15198 467 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 POLR3GO15318 223 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 EIF4E2O60573 245 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 SS18L1O75177 396 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 HRGP04196 525 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TFPTP0C1Z6 253 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 AGTR1P30556 359 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ACAA2P42765 397 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 CRATP43155 626 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 FOXG1P55316 489 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 SUMO3P55854 103 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 CARD18P57730 90 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 KCNJ10P78508 379 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 BNIP2Q12982 314 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 GLIPR1L2Q4G1C9 344 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ATAD3BQ5T9A4 648 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 AP1ARQ63HQ0 302 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 BHLHB9Q6PI77 547 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 LRRC74BQ6ZQY2 392 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ESPNLQ6ZVH7 1005 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 EIF3MQ7L2H7 374 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 CHMP1BQ7LBR1 199 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ADGRG3Q86Y34 549 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TUSC5Q8IXB3 177 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 KIRREL3Q8IZU9 778 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 GLB1L3Q8NCI6 653 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 VPS37AQ8NEZ2 397 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 RNF128Q8TEB7 428 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 DYDC1Q8WWB3 177 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 SPDL1Q96EA4 605 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 MAGEB18Q96M61 343 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ZFP3Q96NJ6 502 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TRNT1Q96Q11 434 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 OR5B2Q96R09 309 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 CCDC28BQ9BUN5 200 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 POLDIP3Q9BY77 421 aaKnown RBP8.4□□□□□ -1.06
GGPS1-204ENST00000471812 VIPAS39Q9H9C1 493 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 ACER3Q9NUN7 267 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 PRSS50Q9UI38 385 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 TESMINQ9Y4I5 508 aa8.4□□□□□ -1.06
GGPS1-204ENST00000471812 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms