RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PRSS44E7EML9 344 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 AP3D1O14617 1153 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 DVL2O14641 736 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 SHOX2O60902 331 aaPredicted RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 MFN2O95140 757 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 TGM6O95932 706 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 OPN1LWP04000 364 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 CRHP06850 196 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 TMIGD3P0DMS9 266 aaPredicted RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 FCGR2AP12318 317 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 SFTPDP35247 375 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 OPRM1P35372 400 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 SLC1A3P43003 542 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 EIF1AXP47813 144 aaKnown RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 MAP2K6P52564 334 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 ZNF136P52737 540 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 CARD18P57730 90 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 COPZ1P61923 177 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 PON3Q15166 354 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 VMACQ2NL98 169 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 TMEM176BQ3YBM2 270 aaPredicted RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 HBMQ6B0K9 141 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 ARMC8Q8IUR7 673 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 NAXEQ8NCW5 288 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 FIG4Q92562 907 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 OSTF1Q92882 214 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 ZNF845Q96IR2 970 aaPredicted RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 ZNF583Q96ND8 569 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 TIGARQ9NQ88 270 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 CTPS2Q9NRF8 586 aa13.73□□□□□ -0.21
SDC3-203ENST00000471567 MCTS1Q9ULC4 181 aaKnown RBP13.73□□□□□ -0.21
SDC3-203ENST00000471567 HECTD1Q9ULT8 2610 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 M0QX08 132 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 TNFSF11O14788 317 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 CXCL13O43927 109 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 SYNGR4O95473 234 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 GKN3PP0CG01 181 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 SHC1P29353 583 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 AQP1P29972 269 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 CLK1P49759 484 aaKnown RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 POLR2HP52434 150 aaKnown RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 VEZF1Q14119 521 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 FAM91A1Q658Y4 838 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 WBP2NLQ6ICG8 309 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 POMZP3Q6PJE2 187 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 ADGRG3Q86Y34 549 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 LIX1LQ8IVB5 337 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 SFXN3Q9BWM7 321 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 RSPO3Q9BXY4 272 aaPredicted RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 ADAM19Q9H013 955 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 RNF122Q9H9V4 155 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 KLHL28Q9NXS3 571 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 CHRNA9Q9UGM1 479 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 FLNBO75369 2602 aaKnown RBP13.72□□□□□ -0.21
SDC3-203ENST00000471567 COL12A1Q99715 3063 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 DOCK7Q96N67 2140 aa13.72□□□□□ -0.21
SDC3-203ENST00000471567 ASH1LQ9NR48 2969 aaKnown RBP13.71□□□□□ -0.21
SDC3-203ENST00000471567 FAM90A27PA6NNH2 459 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 FAM220BPB1ANY3 271 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 NDUFAB1O14561 156 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 GCM2O75603 506 aaPredicted RBP13.71□□□□□ -0.21
SDC3-203ENST00000471567 C8BP07358 591 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 TACR3P29371 465 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 SLC7A1P30825 629 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 DMTNQ08495 405 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 SYT14P1Q58G82 188 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 C8orf82Q6P1X6 216 aaPredicted RBP13.71□□□□□ -0.21
SDC3-203ENST00000471567 PLXDC2Q6UX71 529 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 SLC15A3Q8IY34 581 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 INTS12Q96CB8 462 aaKnown RBP13.71□□□□□ -0.21
SDC3-203ENST00000471567 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 PIF1Q9H611 641 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 COQ10BQ9H8M1 238 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 CMTM6Q9NX76 183 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 OSGIN1Q9UJX0 560 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 SLC13A4Q9UKG4 626 aa13.71□□□□□ -0.21
SDC3-203ENST00000471567 KIAA1549Q9HCM3 1950 aa13.71□□□□□ -0.22
SDC3-203ENST00000471567 CACNA1CQ13936 2221 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 SYT5O00445 386 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 ZNF208O43345 1280 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 TPST1O60507 370 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 PRG2P13727 222 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 BMP5P22003 454 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 NUDT2P50583 147 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 RAC3P60763 192 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 TFF3Q07654 80 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 FOXF2Q12947 444 aa13.7□□□□□ -0.22
SDC3-203ENST00000471567 SP5Q6BEB4 398 aaPredicted RBP13.7□□□□□ -0.22
SDC3-203ENST00000471567 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms