RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LBPP18428 481 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 MATN1P21941 496 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 PEX2P28328 305 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 SOAT1P35610 550 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 KCNJ5P48544 419 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 CTBP2P56545 445 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 CARD18P57730 90 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF117Q03924 483 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 HBMQ6B0K9 141 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 OR4F3Q6IEY1 312 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 C6orf120Q7Z4R8 191 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 LILRA2Q8N149 483 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF610Q8N9Z0 462 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 TOR1AIP2Q8NFQ8 470 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 OR5AK3PQ8NH89 298 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 MIPOL1Q8TD10 442 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 ROPN1LQ96C74 230 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 MRGPRX4Q96LA9 322 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 LRGUKQ96M69 825 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 KLHL15Q96M94 604 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 WFIKKN1Q96NZ8 548 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 MUC13Q9H3R2 512 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 WDR55Q9H6Y2 383 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 GP6Q9HCN6 339 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 RIMS3Q9UJD0 308 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 KCNE3Q9Y6H6 103 aa12.09□□□□□ -0.47
HMGN1-211ENST00000471260 PRRC2AP48634 2157 aaKnown RBP12.09□□□□□ -0.47
HMGN1-211ENST00000471260 CELSR1Q9NYQ6 3014 aa12.08□□□□□ -0.47
HMGN1-211ENST00000471260 A0A0J9YW62 118 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 ETV2O00321 342 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-211ENST00000471260 TNFSF11O14788 317 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 AIM2O14862 343 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF264O43296 627 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CXCL13O43927 109 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 SCN2BO60939 215 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 STX11O75558 287 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 KRT34O76011 436 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 ATE1O95260 518 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 STAMBPO95630 424 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 NUDT14O95848 222 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CD99P14209 185 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 PPP3CBP16298 524 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 UQCRC2P22695 453 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CRYGSP22914 178 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CHN2P52757 468 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 STX1BP61266 288 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CBFBQ13951 182 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF141Q15928 474 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 DEFB113Q30KQ7 82 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 ARHGAP11BQ3KRB8 267 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 MMEL1Q495T6 779 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 SLC25A53Q5H9E4 307 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1-211ENST00000471260 NXNQ6DKJ4 435 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CBLN3Q6UW01 205 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 STK32CQ86UX6 486 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 TGIF2LYQ8IUE0 185 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 OR5D16Q8NGK9 328 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 GPR119Q8TDV5 335 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 NUDT8Q8WV74 236 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 OSTF1Q92882 214 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 REXO5Q96IC2 774 aaKnown RBP12.08□□□□□ -0.48
HMGN1-211ENST00000471260 SLC35G5Q96KT7 338 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 PPP1R36Q96LQ0 422 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 NPAS1Q99742 590 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 OR10A4Q9H209 315 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 C8orf4Q9NR00 106 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 CARD8Q9Y2G2 431 aa12.08□□□□□ -0.48
HMGN1-211ENST00000471260 RNF103-CHMP3A0A140T963 221 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 ANKRD28O15084 1053 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 UBDO15205 165 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 DNAJA2O60884 412 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 UBL4AP11441 157 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 NID1P14543 1247 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 PRKCAP17252 672 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 SLC6A8P48029 635 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 AQP4P55087 323 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 TXNL4AP83876 142 aaKnown RBP12.07□□□□□ -0.48
HMGN1-211ENST00000471260 LRRC74AQ0VAA2 488 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 FOXF1Q12946 379 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 SELENBP1Q13228 472 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 ADRM1Q16186 407 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 LIN52Q52LA3 116 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 SAMD4BQ5PRF9 694 aaKnown RBP12.07□□□□□ -0.48
HMGN1-211ENST00000471260 HEPHL1Q6MZM0 1159 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 PPP4R4Q6NUP7 873 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms