RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ZNF75CPQ92670 426 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 GTPBP3Q969Y2 492 aaKnown RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 TESCQ96BS2 214 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 MUCL1Q96DR8 90 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 PPP1R36Q96LQ0 422 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF300Q96RE9 604 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 EMC3Q9P0I2 261 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 RAP2CQ9Y3L5 183 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 WDR45Q9Y484 360 aa15.48■□□□□ 0.07
COL7A1-208ENST00000470076 SONP18583 2426 aaKnown RBP15.48■□□□□ 0.07
COL7A1-208ENST00000470076 A0A1W2PP18 115 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 DPRXA6NFQ7 191 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 C9JVG2 144 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ANKRD28O15084 1053 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 OR12D1P0DN82 309 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 COX5AP20674 150 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 FKBP2P26885 142 aaKnown RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 IDUAP35475 653 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 PGM1P36871 562 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 PDK3Q15120 406 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 PPA1Q15181 289 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 STK11Q15831 433 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 MAPK14Q16539 360 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 CLEC12BQ2HXU8 276 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 DPY19L1Q2PZI1 675 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 TIMM23BQ5SRD1 257 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 TYW3Q6IPR3 259 aaKnown RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 WDR93Q6P2C0 686 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 OLIG3Q7RTU3 272 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ATG4DQ86TL0 474 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 MTDHQ86UE4 582 aaKnown RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ANKRD46Q86W74 232 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 PRIMA1Q86XR5 153 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 LRRC34Q8IZ02 419 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 KBTBD8Q8NFY9 601 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 NEUROG1Q92886 237 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF775Q96BV0 537 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ROPN1LQ96C74 230 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ZHX1-C8orf76Q96EF9 292 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 TRIM2Q9C040 744 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 SAP130Q9H0E3 1048 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 PLCE1Q9P212 2302 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 MAGED1Q9Y5V3 778 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-208ENST00000470076 ATRQ13535 2644 aa15.47■□□□□ 0.07
COL7A1-208ENST00000470076 IGKV3D-15A0A087WSY6 115 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 CPSF4O95639 269 aaKnown RBP15.46■□□□□ 0.07
COL7A1-208ENST00000470076 TFPIP10646 304 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 GGT1P19440 569 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 IGHV1-2P23083 117 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 EDNRAP25101 427 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 KHKP50053 298 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 RPL14P50914 215 aaKnown RBP15.46■□□□□ 0.07
COL7A1-208ENST00000470076 CASP9P55211 416 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 PHC1P78364 1004 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 VEZF1Q14119 521 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 CASP8Q14790 479 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 KRT71Q3SY84 523 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 SAXO2Q658L1 398 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 ABLIM2Q6H8Q1 611 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 TNFAIP8L2Q6P589 184 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-208ENST00000470076 ZNF563Q8TA94 476 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 RAB8BQ92930 207 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 NEURL3Q96EH8 262 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 CCDC106Q9BWC9 280 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 SSU72Q9NP77 194 aaKnown RBP15.46■□□□□ 0.07
COL7A1-208ENST00000470076 EXOSC3Q9NQT5 275 aaKnown RBP15.46■□□□□ 0.07
COL7A1-208ENST00000470076 CHRNA9Q9UGM1 479 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 LIPT1Q9Y234 373 aa15.46■□□□□ 0.07
COL7A1-208ENST00000470076 ABCA1O95477 2261 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 TM9SF1O15321 606 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 RGS16O15492 202 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 DNPH1O43598 174 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 PGM3O95394 542 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 CDKN1AP38936 164 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 SLC1A6P48664 564 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 CLK1P49759 484 aaKnown RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 CLNS1AP54105 237 aaKnown RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 HPCAP84074 193 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 PGGHGQ32M88 737 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 FBXW9Q5XUX1 488 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 FRRS1Q6ZNA5 592 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 GRINAQ7Z429 371 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 MREGQ8N565 214 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 ZNF433Q8N7K0 673 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 GRIP2Q9C0E4 1043 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 C20orf27Q9GZN8 174 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 ALG2Q9H553 416 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 CTPS2Q9NRF8 586 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 FAIMQ9NVQ4 179 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 CISD1Q9NZ45 108 aaKnown RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 MARCOQ9UEW3 520 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-208ENST00000470076 HAO1Q9UJM8 370 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 HDGFL3Q9Y3E1 203 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 COL6A5A8TX70 2615 aa15.45■□□□□ 0.06
COL7A1-208ENST00000470076 OR5H1A6NKK0 313 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 ZNF716A6NP11 495 aa15.44■□□□□ 0.06
COL7A1-208ENST00000470076 RNF223E7ERA6 249 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms