RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 HDHD5Q9BXW7 423 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 GSX2Q9BZM3 304 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 CADP27708 2225 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ZANQ9Y493 2812 aa14.47□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF724A8MTY0 619 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 C9JVG2 144 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 HDAC3O15379 428 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 EDNRAP25101 427 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 EPHA3P29320 983 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 CHI3L1P36222 383 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 CDKN2CP42773 168 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 NME5P56597 212 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 TXNL4AP83876 142 aaKnown RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 CHRNEQ04844 493 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 RASGEF1BQ0VAM2 473 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 TSC22D1Q15714 1073 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 TAB1Q15750 504 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 HHATQ5VTY9 493 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 TMPPEQ6ZT21 453 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 Q6ZT83 130 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 RNF130Q86XS8 419 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 P3H2Q8IVL5 708 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 MAELQ96JY0 434 aaKnown RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 TRNT1Q96Q11 434 aaKnown RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 ZNF300Q96RE9 604 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 PAIP2Q9BPZ3 127 aaKnown RBP14.46□□□□□ -0.09
COL9A3-208ENST00000469802 INPP5KQ9BT40 448 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 POTEKPQ9BYX7 375 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 SLC38A1Q9H2H9 487 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 SERINC1Q9NRX5 453 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 THAP1Q9NVV9 213 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 CHRNA9Q9UGM1 479 aa14.46□□□□□ -0.09
COL9A3-208ENST00000469802 USF3Q68DE3 2245 aa14.46□□□□□ -0.1
COL9A3-208ENST00000469802 IGKV3D-15A0A087WSY6 115 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 CCDC154A6NI56 674 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 CLDN24A6NM45 220 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 HS3ST1O14792 307 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 TMCC2O75069 709 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ADAP00813 363 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 FESP07332 822 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 CHRM4P08173 479 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 COX5AP20674 150 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 RPS4Y1P22090 263 aaKnown RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 IL32P24001 234 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 APOBEC1P41238 236 aaKnown RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 KCNJ10P78508 379 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 HPCAP84074 193 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 LRRC74AQ0VAA2 488 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ITGADQ13349 1161 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ADAM5Q6NVV9 412 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 GRINAQ7Z429 371 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 HMGN2P46Q86SG4 172 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 TRIML2Q8N7C3 387 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF611Q8N823 705 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ANKFN1Q8N957 763 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 RAB3IL1Q8TBN0 382 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 KISS1RQ969F8 398 aaPredicted RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 PERPQ96FX8 193 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 OR52E6Q96RD3 313 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 PANX1Q96RD7 426 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 USB1Q9BQ65 265 aaKnown RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 CTPS2Q9NRF8 586 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF701Q9NV72 531 aaPredicted RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 PRSS50Q9UI38 385 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 LIPT1Q9Y234 373 aa14.45□□□□□ -0.1
COL9A3-208ENST00000469802 FN1P02751 2386 aaKnown RBP14.45□□□□□ -0.1
COL9A3-208ENST00000469802 GOLGA8QA0A0J9YX86 632 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 GOLGA8OA6NCC3 632 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 AGAP5A6NIR3 686 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 TRPC5OSA6NMA1 111 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 ZNF716A6NP11 495 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 GOLGA8NF8WBI6 632 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 SULT2B1O00204 365 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 DNPH1O43598 174 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 PTH2RP49190 550 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 CSNK2A1P68400 391 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 PDK3Q15120 406 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 SYPL1Q16563 259 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 GPAT3Q53EU6 434 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 NCMAPQ5T1S8 102 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 LRRC74BQ6ZQY2 392 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 YTHDF3Q7Z739 585 aaKnown RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 CMIPQ8IY22 773 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 GLB1L3Q8NCI6 653 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 HSD17B8Q92506 261 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 CNOT9Q92600 299 aaKnown RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 TLCD1Q96CP7 247 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 Q96MF0 132 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 SPIN1Q9Y657 262 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-208ENST00000469802 TLN2Q9Y4G6 2542 aa14.44□□□□□ -0.1
COL9A3-208ENST00000469802 FAAHO00519 579 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 CNOT4O95628 575 aaKnown RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 PMS2P2O95744 297 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 IDO1P14902 403 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ADSLP30566 484 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 RYKP34925 604 aa14.43□□□□□ -0.1
COL9A3-208ENST00000469802 CLK1P49759 484 aaKnown RBP14.43□□□□□ -0.1
COL9A3-208ENST00000469802 ANXA11P50995 505 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms