RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
SDCCAG3-209ENST00000468963 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
SDCCAG3-209ENST00000468963 SERINC1Q9NRX5 453 aa13.11□□□□□ -0.31
SDCCAG3-209ENST00000468963 PRSS50Q9UI38 385 aa13.11□□□□□ -0.31
SDCCAG3-209ENST00000468963 PLCE1Q9P212 2302 aa13.11□□□□□ -0.31
SDCCAG3-209ENST00000468963 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 DPRXA6NFQ7 191 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 KIAA0513O60268 411 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 CD3EP07766 207 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 UBTFL6P0CB48 400 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 LBPP18428 481 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 PGCP20142 388 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 BGNP21810 368 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 DIO1P49895 249 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 FUT5Q11128 374 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 MERTKQ12866 999 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 SPANXN4Q5MJ08 99 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 TNFAIP8L2Q6P589 184 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 ATG4DQ86TL0 474 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 CCDC106Q9BWC9 280 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 PARD6BQ9BYG5 372 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 PNPOQ9NVS9 261 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 LAMP3Q9UQV4 416 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
SDCCAG3-209ENST00000468963 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ADAM11O75078 769 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 PGM3O95394 542 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 SOD3P08294 240 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ATP5J2P56134 94 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 KCNJ10P78508 379 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 PLAURQ03405 335 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 CHRNEQ04844 493 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 STX3Q13277 289 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 PDK3Q15120 406 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ATAD3BQ5T9A4 648 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 GALNT5Q7Z7M9 940 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ADGRG3Q86Y34 549 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 TEX37Q96LM6 180 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 CCDC115Q96NT0 180 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 POTEKPQ9BYX7 375 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ESRP2Q9H6T0 727 aaKnown RBP13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 MEAF6Q9HAF1 191 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 CTPS2Q9NRF8 586 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 BTNL2Q9UIR0 455 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ABCA1O95477 2261 aa13.09□□□□□ -0.31
SDCCAG3-209ENST00000468963 ATRQ13535 2644 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 CLDN24A6NM45 220 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 ZNF716A6NP11 495 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 SULT2B1O00204 365 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 HMGN4O00479 90 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 CLOCKO15516 846 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 LYZL6O75951 148 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 FESP07332 822 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 THBS1P07996 1170 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 ALDOCP09972 364 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 COX5AP20674 150 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 IGHV1-2P23083 117 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 IL12AP29459 219 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 S100A3P33764 101 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 NTF4P34130 210 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 UFM1P61960 85 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 CSNK2A1P68400 391 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 DPY19L1Q2PZI1 675 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 ZNF672Q499Z4 452 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 SMAP2Q8WU79 429 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 SLC35A5Q9BS91 424 aa13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 MARCOQ9UEW3 520 aaPredicted RBP13.08□□□□□ -0.32
SDCCAG3-209ENST00000468963 SDHDO14521 159 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 PMS2P2O95744 297 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 FKBP2P26885 142 aaKnown RBP13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 RYKP34925 604 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 BSPH1Q075Z2 132 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 BST1Q10588 318 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 TNK1Q13470 666 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 FAM174BQ3ZCQ3 159 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 TIMM23BQ5SRD1 257 aa13.07□□□□□ -0.32
SDCCAG3-209ENST00000468963 ABLIM2Q6H8Q1 611 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms