RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 WDR73Q6P4I2 378 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 CBLN3Q6UW01 205 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 CD300LDQ6UXZ3 194 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 KIF18BQ86Y91 864 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 MOSPD2Q8NHP6 518 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 APH1BQ8WW43 257 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 OMA1Q96E52 524 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SLC41A3Q96GZ6 507 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 HRASLS5Q96KN8 279 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ADOQ96SZ5 270 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 FNDC11Q9BVV2 318 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 Q9H521 79 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 NXT1Q9UKK6 140 aaKnown RBP7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SLC7A7Q9UM01 511 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 OR10H1Q9Y4A9 318 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SESN1Q9Y6P5 492 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 LAMA5O15230 3695 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 A0A0B4J2E0 115 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 A0A1B0GX12 115 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 MAGEA13PA6NCF6 341 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ANXA8P13928 327 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 GABRB1P18505 474 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ARHGDIAP52565 204 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 GAS1P54826 345 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 Q0VFX4 171 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 EPS8Q12929 822 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 FHL1Q13642 323 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 APOFQ13790 326 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 KEAP1Q14145 624 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 DECR1Q16698 335 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CDONQ4KMG0 1287 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 DCST1Q5T197 706 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 LHFPL2Q6ZUX7 228 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 PPP1R32Q7Z5V6 425 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ATG16L2Q8NAA4 619 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 OR8K3Q8NH51 312 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 POC1BQ8TC44 478 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 FGF11Q92914 225 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 HGDQ93099 445 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 NTNG2Q96CW9 530 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 HSPBAP1Q96EW2 488 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 MED30Q96HR3 178 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ANKRD19PQ9H560 264 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 COPS7AQ9UBW8 275 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 PTRH2Q9Y3E5 179 aaKnown RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 FRYQ5TBA9 3013 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TMX2-CTNND1H3BSU7 103 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 DYRK3O43781 588 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 RAB40ALP0C0E4 278 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 RYKP34925 604 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CD47Q08722 323 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 C19orf57Q0VDD7 668 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 RFX4Q33E94 735 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 FGD3Q5JSP0 725 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CMIPQ8IY22 773 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 SLC34A3Q8N130 599 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 OR4K5Q8NGD3 323 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 POLR2J2Q9GZM3 115 aaKnown RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 POLR2J3Q9H1A7 115 aaKnown RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 RIBC2Q9H4K1 309 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 UBQLN4Q9NRR5 601 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TESQ9UGI8 421 aaKnown RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TRBV11-1A0A0K0K1C0 115 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ZSCAN5BA6NJL1 495 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 NUDT19A8MXV4 375 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CDC42EP2O14613 210 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 MAGEB3O15480 346 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 CHMP24386 653 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 HTR3AP46098 478 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 GSSP48637 474 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 FXYD6P3P58550 94 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TAS2R41P59536 307 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TARDBPQ13148 414 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 C3orf38Q5JPI3 329 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 HSDL2Q6YN16 418 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 SLC29A4Q7RTT9 530 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 OIT3Q8WWZ8 545 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 METTL21AQ8WXB1 218 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 MEPEQ9NQ76 525 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-208ENST00000468300 PNPLA3Q9NST1 481 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 C20orf141Q9NUB4 165 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 TCFL5Q9UL49 500 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 POFUT2Q9Y2G5 429 aa7.56□□□□□ -1.2
BRCA1-208ENST00000468300 ZAR1LA6NP61 321 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 BCKDKO14874 412 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 WBP4O75554 376 aaKnown RBP7.55□□□□□ -1.2
BRCA1-208ENST00000468300 ADAP00813 363 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 PTNP21246 168 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 PTGDSP41222 190 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 PNLIPRP2P54317 469 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 UGT2B15P54855 530 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 EFNB1P98172 346 aa7.55□□□□□ -1.2
BRCA1-208ENST00000468300 ST3GAL3Q11203 375 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms