RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DCAF12Q5T6F0 453 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 YOD1Q5VVQ6 348 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 PGBD2Q6P3X8 592 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 SYCE2Q6PIF2 218 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 UBALD2Q8IYN6 164 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 FTMTQ8N4E7 242 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF417Q8TAU3 575 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 TNFRSF13CQ96RJ3 184 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 SPNS1Q9H2V7 528 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 FARSAQ9Y285 508 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 LOC105369274A0A096LPK9 316 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 LOC102723532A0A0G2JNH3 316 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 CIB4A0PJX0 185 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 TVP23AA6NH52 213 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 FGF17O60258 216 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 UTS2O95399 124 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 THBS1P07996 1170 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 TRIM23P36406 574 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 MRPL19P49406 292 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 C3orf38Q5JPI3 329 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 OR4N4Q8N0Y3 316 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 LSM14AQ8ND56 463 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 C4orf36Q96KX1 117 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 MRI1Q9BV20 369 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 KATNB1Q9BVA0 655 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 MEPEQ9NQ76 525 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 PTTG1O95997 202 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 GTF2F2P13984 249 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 RPS5P46782 204 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 E2F1Q01094 437 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 EIF2B1Q14232 305 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 RAB11BQ15907 218 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF584Q8IVC4 421 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 NAXEQ8NCW5 288 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ACTR6Q9GZN1 396 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 BCL2L10Q9HD36 194 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 CCDC59Q9P031 241 aaKnown RBP12.8□□□□□ -0.36
BRAT1-203ENST00000467558 KLK4Q9Y5K2 254 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 AGAP14A8MT82 685 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 METTL12A8MUP2 240 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 MMP11P24347 488 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 CD97P48960 835 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 ISL1P61371 349 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 C17orf67Q0P5P2 114 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 NXNL2Q5VZ03 156 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 IL20RBQ6UXL0 311 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 PTOV1Q86YD1 416 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 SH2B3Q9UQQ2 575 aa12.8□□□□□ -0.36
BRAT1-203ENST00000467558 GAPDHSO14556 408 aaPredicted RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 CHP2O43745 196 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 IFNA21P01568 189 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 DRD3P35462 400 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 GLP1RP43220 463 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 PSPHP78330 225 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 KIAA0040Q15053 153 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 ARHGAP11BQ3KRB8 267 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 OR2G6Q5TZ20 316 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 DHRS4L2Q6PKH6 230 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 TRMT10AQ8TBZ6 339 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 TMEM255BQ8WV15 326 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 WSB2Q9NYS7 404 aaPredicted RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 MBD2Q9UBB5 411 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 MTRF1O75570 445 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 IL1AP01583 271 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 IGHEP01854 428 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 F13BP05160 661 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 OCLNQ16625 522 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 PYHIN1Q6K0P9 492 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 Q6ZS52 159 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 RBM45Q8IUH3 476 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 DTX3Q8N9I9 347 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 CLEC1AQ8NC01 280 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 NAA50Q9GZZ1 169 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 LTB4R2Q9NPC1 389 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 VNN3Q9NY84 501 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 NOP16Q9Y3C1 178 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 SYT7O43581 403 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 FNTBP49356 437 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
BRAT1-203ENST00000467558 NKAIN1Q4KMZ8 207 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF836Q6ZNA1 936 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 CAMKMTQ7Z624 323 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 PLCZ1Q86YW0 608 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 OR7G2Q8NG99 324 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 MVB12AQ96EY5 273 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 PRR14Q9BWN1 585 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 BEX2Q9BXY8 128 aa12.79□□□□□ -0.36
BRAT1-203ENST00000467558 BEX1Q9HBH7 125 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms