RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OIT3Q8WWZ8 545 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 DNAJA3Q96EY1 480 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 COX4I2Q96KJ9 171 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 PSD2Q9BQI7 771 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 BCO1Q9HAY6 547 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 PNPOQ9NVS9 261 aa15.56■□□□□ 0.08
COL7A1-206ENST00000466591 NOSIPQ9Y314 301 aaKnown RBP15.56■□□□□ 0.08
COL7A1-206ENST00000466591 ZFHX3Q15911 3703 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 CCT8L1PA6NM43 557 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 TRPC5OSA6NMA1 111 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 SMAD9O15198 467 aaKnown RBP15.55■□□□□ 0.08
COL7A1-206ENST00000466591 CYTIPO60759 359 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 GCM2O75603 506 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-206ENST00000466591 H6PDO95479 791 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 ANP32DO95626 131 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 CNOT4O95628 575 aaKnown RBP15.55■□□□□ 0.08
COL7A1-206ENST00000466591 NR2F1P10589 423 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 GGT1P19440 569 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 LOXP28300 417 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-206ENST00000466591 OR3A2P47893 321 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 OR2B6P58173 313 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 LRRC74AQ0VAA2 488 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 VEZF1Q14119 521 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 PPA1Q15181 289 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 SAXO2Q658L1 398 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 HEPHL1Q6MZM0 1159 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 TMPPEQ6ZT21 453 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 GRINAQ7Z429 371 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 SPATA19Q7Z5L4 167 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 RNF130Q86XS8 419 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 LRRC34Q8IZ02 419 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 RAB3IL1Q8TBN0 382 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 MIPOL1Q8TD10 442 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 APH1AQ96BI3 265 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 NEURL3Q96EH8 262 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 OR52E6Q96RD3 313 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF300Q96RE9 604 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-206ENST00000466591 FAIMQ9NVQ4 179 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 CHRNA9Q9UGM1 479 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 PRSS50Q9UI38 385 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 LIPT1Q9Y234 373 aa15.55■□□□□ 0.08
COL7A1-206ENST00000466591 FLNAP21333 2647 aaKnown RBP15.54■□□□□ 0.08
COL7A1-206ENST00000466591 CENPVL1A0A0U1RR11 272 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 CCDC154A6NI56 674 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 KITP10721 976 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 IL7RP16871 459 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 FKBP2P26885 142 aaKnown RBP15.54■□□□□ 0.08
COL7A1-206ENST00000466591 PCSK6P29122 969 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 HTR3AP46098 478 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 IDH2P48735 452 aaKnown RBP15.54■□□□□ 0.08
COL7A1-206ENST00000466591 KCNJ10P78508 379 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 BST1Q10588 318 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 FAPQ12884 760 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 CASP8Q14790 479 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 ADAM5Q6NVV9 412 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 SSX8Q7RTT4 187 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 CIARTQ8N365 385 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-206ENST00000466591 PIGXQ8TBF5 258 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 PNPT1Q8TCS8 783 aaKnown RBP15.54■□□□□ 0.08
COL7A1-206ENST00000466591 DDIT4LQ96D03 193 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 SORT1Q99523 831 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 C20orf27Q9GZN8 174 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 MEAF6Q9HAF1 191 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 CTPS2Q9NRF8 586 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 NKIRAS1Q9NYS0 192 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 KCNE5Q9UJ90 142 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 POU2F3Q9UKI9 436 aa15.54■□□□□ 0.08
COL7A1-206ENST00000466591 MAP1AP78559 2803 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-206ENST00000466591 DSCAMO60469 2012 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 ACANP16112 2415 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 GOLGA8QA0A0J9YX86 632 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 GOLGA8OA6NCC3 632 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 TMEM247A6NEH6 219 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF724A8MTY0 619 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 GOLGA8NF8WBI6 632 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 GPR171O14626 319 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 KRT75O95678 551 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 IGHV3-9P01782 118 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 PGM1P36871 562 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 MAGEA8P43361 318 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 UFM1P61960 85 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 CHRNEQ04844 493 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 BSPH1Q075Z2 132 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 MAPK14Q16539 360 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 NCMAPQ5T1S8 102 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 ATG16L1Q676U5 607 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 MTDHQ86UE4 582 aaKnown RBP15.53■□□□□ 0.08
COL7A1-206ENST00000466591 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-206ENST00000466591 SMAP2Q8WU79 429 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-206ENST00000466591 WDR60Q8WVS4 1066 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 BTNL2Q9UIR0 455 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 HDGFL3Q9Y3E1 203 aa15.53■□□□□ 0.08
COL7A1-206ENST00000466591 ZNF814B7Z6K7 855 aa15.52■□□□□ 0.08
COL7A1-206ENST00000466591 MRPL33O75394 65 aaKnown RBP15.52■□□□□ 0.08
COL7A1-206ENST00000466591 RAD51DO75771 328 aa15.52■□□□□ 0.08
COL7A1-206ENST00000466591 GSNP06396 782 aa15.52■□□□□ 0.08
COL7A1-206ENST00000466591 PGRP06401 933 aa15.52■□□□□ 0.08
COL7A1-206ENST00000466591 DHRS4L1P0CG22 281 aa15.52■□□□□ 0.08
COL7A1-206ENST00000466591 TXNL4AP83876 142 aaKnown RBP15.52■□□□□ 0.08
COL7A1-206ENST00000466591 KLHL17Q6TDP4 642 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms