RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RAB8BQ92930 207 aa16.96■□□□□ 0.31
COL9A3-206ENST00000466532 TRMT61AQ96FX7 289 aaKnown RBP16.96■□□□□ 0.31
COL9A3-206ENST00000466532 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
COL9A3-206ENST00000466532 SLC35A3Q9Y2D2 325 aa16.96■□□□□ 0.31
COL9A3-206ENST00000466532 WDR45Q9Y484 360 aa16.96■□□□□ 0.31
COL9A3-206ENST00000466532 DNHD1Q96M86 4753 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 PRSS51A0A1B0GVH4 220 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 A0A1W2PP18 115 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 DPRXA6NFQ7 191 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 OVOL3O00110 214 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 BIRC5O15392 142 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 SCN2BO60939 215 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 TFPIP10646 304 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 PGM1P36871 562 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 PHC1P78364 1004 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 VEZF1Q14119 521 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 PPA1Q15181 289 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 CLEC12BQ2HXU8 276 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 ANXA8L1Q5VT79 327 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 GALNT5Q7Z7M9 940 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 FAM71CQ8NEG0 241 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 ZNF563Q8TA94 476 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 SLC25A43Q8WUT9 341 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 ZNF75CPQ92670 426 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 GTPBP3Q969Y2 492 aaKnown RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 TESCQ96BS2 214 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 ROPN1LQ96C74 230 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 POLE3Q9NRF9 147 aa16.95■□□□□ 0.3
COL9A3-206ENST00000466532 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 MAGED1Q9Y5V3 778 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 SPIN1Q9Y657 262 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-206ENST00000466532 JMJD1CQ15652 2540 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 RGS16O15492 202 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-206ENST00000466532 BCAS1O75363 584 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-206ENST00000466532 GUSBP08236 651 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 IGHV1-2P23083 117 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 RYKP34925 604 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 CHI3L1P36222 383 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-206ENST00000466532 CDKN1AP38936 164 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 APOBEC1P41238 236 aaKnown RBP16.94■□□□□ 0.3
COL9A3-206ENST00000466532 SLC1A6P48664 564 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 KHKP50053 298 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 RPL14P50914 215 aaKnown RBP16.94■□□□□ 0.3
COL9A3-206ENST00000466532 FUT5Q11128 374 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 SPANXN4Q5MJ08 99 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 SAXO2Q658L1 398 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 ABLIM2Q6H8Q1 611 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 WDR93Q6P2C0 686 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 OIT3Q8WWZ8 545 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 MUCL1Q96DR8 90 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 SORT1Q99523 831 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 SAP130Q9H0E3 1048 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 CTPS2Q9NRF8 586 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 EMC3Q9P0I2 261 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 CHRNA9Q9UGM1 479 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 LIPT1Q9Y234 373 aa16.94■□□□□ 0.3
COL9A3-206ENST00000466532 ANKRD28O15084 1053 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 SNUPNO95149 360 aaKnown RBP16.93■□□□□ 0.3
COL9A3-206ENST00000466532 LBPP18428 481 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 GGT1P19440 569 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 COX5AP20674 150 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 IDUAP35475 653 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 CLNS1AP54105 237 aaKnown RBP16.93■□□□□ 0.3
COL9A3-206ENST00000466532 HPCAP84074 193 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 FAPQ12884 760 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 CASP8Q14790 479 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 ETFDHQ16134 617 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 GPAT3Q53EU6 434 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 TIMM23BQ5SRD1 257 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 FRRS1Q6ZNA5 592 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 HMGN2P46Q86SG4 172 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 MTDHQ86UE4 582 aaKnown RBP16.93■□□□□ 0.3
COL9A3-206ENST00000466532 ZG16BQ96DA0 208 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 ZHX1-C8orf76Q96EF9 292 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 NEURL3Q96EH8 262 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 DNAJA3Q96EY1 480 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 SLC35A5Q9BS91 424 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 CCDC106Q9BWC9 280 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 NUF2Q9BZD4 464 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 TRIM2Q9C040 744 aa16.93■□□□□ 0.3
COL9A3-206ENST00000466532 SSU72Q9NP77 194 aaKnown RBP16.93■□□□□ 0.3
COL9A3-206ENST00000466532 MARCOQ9UEW3 520 aaPredicted RBP16.93■□□□□ 0.3
COL9A3-206ENST00000466532 RNF223E7ERA6 249 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 TM9SF1O15321 606 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 RAMP1O60894 148 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 BGNP21810 368 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 DPY19L1Q2PZI1 675 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 PGGHGQ32M88 737 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 FAM174BQ3ZCQ3 159 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 DNAJC14Q6Y2X3 702 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 GRINAQ7Z429 371 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 UBE2J2Q8N2K1 259 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 MREGQ8N565 214 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 CISD1Q9NZ45 108 aaKnown RBP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 NPAP1Q9NZP6 1156 aa16.92■□□□□ 0.3
COL9A3-206ENST00000466532 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 NOSIPQ9Y314 301 aaKnown RBP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 V9GYY5 206 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-206ENST00000466532 IGKV3D-15A0A087WSY6 115 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 359.9 ms