RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SAP130Q9H0E3 1048 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ABCB10Q9NRK6 738 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 CALML5Q9NZT1 146 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 PPIEQ9UNP9 301 aaKnown RBP17.09■□□□□ 0.33
CAPN3-209ENST00000466222 AHCTF1Q8WYP5 2266 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 A0A075B6Q4 140 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 KIAA0513O60268 411 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 RAB40ALP0C0E4 278 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 POU2F1P14859 743 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 SPINK2P20155 84 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 DRD5P21918 477 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 RPS15P62841 145 aaKnown RBP17.09■□□□□ 0.33
CAPN3-209ENST00000466222 PRAMEF8Q5VWM4 474 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 PRAMEF7Q5VXH5 474 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 SLC29A4Q7RTT9 530 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF619Q8N2I2 560 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF441Q8N8Z8 693 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 C7orf57Q8NEG2 295 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 CHCHD6Q9BRQ6 235 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 TAPBPLQ9BX59 468 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF160Q9HCG1 818 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 CRNNQ9UBG3 495 aaPredicted RBP17.09■□□□□ 0.33
CAPN3-209ENST00000466222 REV1Q9UBZ9 1251 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 ACAD8Q9UKU7 415 aa17.09■□□□□ 0.33
CAPN3-209ENST00000466222 FRG2CA6NGY1 282 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 WWP2O00308 870 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 FFAR1O14842 300 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.33
CAPN3-209ENST00000466222 ELAVL4P26378 380 aaKnown RBP17.08■□□□□ 0.33
CAPN3-209ENST00000466222 TMED10P49755 219 aaKnown RBP17.08■□□□□ 0.33
CAPN3-209ENST00000466222 ALDH6A1Q02252 535 aaKnown RBP17.08■□□□□ 0.33
CAPN3-209ENST00000466222 CAMK2BQ13554 666 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 HLA-DQA1Q5Y7H0 255 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 IMMP1LQ96LU5 166 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 ADOQ96SZ5 270 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF700Q9H0M5 742 aa17.08■□□□□ 0.33
CAPN3-209ENST00000466222 ENDOUP21128 410 aaKnown RBP17.08■□□□□ 0.32
CAPN3-209ENST00000466222 DEFA1P59665 94 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 DEFA3P59666 94 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 PLAURQ03405 335 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 SRSF6Q13247 344 aaKnown RBP17.08■□□□□ 0.32
CAPN3-209ENST00000466222 MED22Q15528 200 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 TSTQ16762 297 aaKnown RBP17.08■□□□□ 0.32
CAPN3-209ENST00000466222 PDZK1Q5T2W1 519 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 ZNF836Q6ZNA1 936 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 ATCAYQ86WG3 371 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 PARP16Q8N5Y8 322 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 IL22RA1Q8N6P7 574 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 ZNF614Q8N883 585 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 CENPOQ9BU64 300 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 CTPS2Q9NRF8 586 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 INIPQ9NRY2 104 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 RHCGQ9UBD6 479 aa17.08■□□□□ 0.32
CAPN3-209ENST00000466222 ZNF443Q9Y2A4 671 aaPredicted RBP17.08■□□□□ 0.32
CAPN3-209ENST00000466222 RPL36Q9Y3U8 105 aaKnown RBP17.08■□□□□ 0.32
CAPN3-209ENST00000466222 TRBV4-1A0A0J9YWV2 114 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 TBX1O43435 398 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 LGI1O95970 557 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 AK1P00568 194 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 SCG5P05408 212 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 HSMCR30P0CW71 290 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 OCLNQ16625 522 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 STEAP3Q658P3 488 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 CASP12Q6UXS9 341 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 NCCRP1Q6ZVX7 275 aaPredicted RBP17.07■□□□□ 0.32
CAPN3-209ENST00000466222 DTX1Q86Y01 620 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 PEX5LQ8IYB4 626 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 POC5Q8NA72 575 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 OR6T1Q8NGN1 323 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 CHAC2Q8WUX2 184 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 TMEM80Q96HE8 168 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 TXNDC15Q96J42 360 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 CCDC32Q9BV29 185 aa17.07■□□□□ 0.32
CAPN3-209ENST00000466222 SDK2Q58EX2 2172 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SYNDIG1LA6NDD5 238 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 OR6C76A6NM76 312 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 TPST2O60704 377 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 CYC1P08574 325 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 ABCD3P28288 659 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 EEF1A1P68104 462 aaKnown RBP17.06■□□□□ 0.32
CAPN3-209ENST00000466222 COX10Q12887 443 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SSPNQ14714 243 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 DECR1Q16698 335 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SPANXN2Q5MJ10 180 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 FCRLBQ6BAA4 426 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 TCTN3Q6NUS6 607 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 CD300LDQ6UXZ3 194 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 OR8J1Q8NGP2 316 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 OR5M11Q96RB7 305 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 SPATA5L1Q9BVQ7 753 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 NTNG1Q9Y2I2 539 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 NSG1A0A0A6YYJ2 146 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 C17orf51A8MQB3 221 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 REM1O75628 298 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 RPS4Y1P22090 263 aaKnown RBP17.06■□□□□ 0.32
CAPN3-209ENST00000466222 POU1F1P28069 291 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 Q0VFX4 171 aa17.06■□□□□ 0.32
CAPN3-209ENST00000466222 APOOLQ6UXV4 268 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms