RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NR2F1P10589 423 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 TXNL4AP83876 142 aaKnown RBP19.38■□□□□ 0.69
LIME1-203ENST00000465591 RNPS1Q15287 305 aaKnown RBP19.38■□□□□ 0.69
LIME1-203ENST00000465591 GTF2IRD2BQ6EKJ0 949 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 TFAP2EQ6VUC0 442 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 MSANTD1Q6ZTZ1 278 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 RAI1Q7Z5J4 1906 aaPredicted RBP19.38■□□□□ 0.69
LIME1-203ENST00000465591 GTF2IRD2Q86UP8 949 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 ARFGAP2Q8N6H7 521 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 ZNF563Q8TA94 476 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 GTF2H4Q92759 462 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 DNAJA3Q96EY1 480 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 HS3ST6Q96QI5 342 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 TPT1P8Q9HAU6 139 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 TCF7L2Q9NQB0 619 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 ZNF226Q9NYT6 803 aa19.38■□□□□ 0.69
LIME1-203ENST00000465591 FAM234BA2RU67 622 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 HMGB1P1B2RPK0 211 aaPredicted RBP19.37■□□□□ 0.69
LIME1-203ENST00000465591 SASH3O75995 380 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 PRKD3O94806 890 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 HOXB9P17482 250 aaPredicted RBP19.37■□□□□ 0.69
LIME1-203ENST00000465591 EDNRAP25101 427 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 ANXA11P50995 505 aaKnown RBP19.37■□□□□ 0.69
LIME1-203ENST00000465591 SYT14P1Q58G82 188 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 TMEM201Q5SNT2 666 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 SLC2A7Q6PXP3 512 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 ADGRG3Q86Y34 549 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 FUNDC1Q8IVP5 155 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 WDR60Q8WVS4 1066 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 MBD6Q96DN6 1003 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 PIK3IP1Q96FE7 263 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 ITCHQ96J02 903 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 PSD2Q9BQI7 771 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 PAIP1Q9H074 479 aaKnown RBP19.37■□□□□ 0.69
LIME1-203ENST00000465591 MTHFD2LQ9H903 347 aaPredicted RBP19.37■□□□□ 0.69
LIME1-203ENST00000465591 ARID1AO14497 2285 aa19.37■□□□□ 0.69
LIME1-203ENST00000465591 DSCAMO60469 2012 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 DSPPQ9NZW4 1301 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 GCM2O75603 506 aaPredicted RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 ANP32DO95626 131 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 TFPTP0C1Z6 253 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 CRATP43155 626 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 IDH2P48735 452 aaKnown RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 MRPL19P49406 292 aaKnown RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 DIO1P49895 249 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 TSC22D1Q15714 1073 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 RPS26P11Q5JNZ5 115 aaPredicted RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 C6orf10Q5SRN2 563 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 MRPL2Q5T653 305 aaKnown RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 TMPPEQ6ZT21 453 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 BEND4Q6ZU67 534 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 GRINAQ7Z429 371 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 ZNF775Q96BV0 537 aaPredicted RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 ARL5BQ96KC2 179 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 ZNF300Q96RE9 604 aaPredicted RBP19.36■□□□□ 0.69
LIME1-203ENST00000465591 OR11A1Q9GZK7 315 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 RMND5AQ9H871 391 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 GP6Q9HCN6 339 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 SERINC1Q9NRX5 453 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 RLIMQ9NVW2 624 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 CHRNA9Q9UGM1 479 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 PCDHB14Q9Y5E9 798 aa19.36■□□□□ 0.69
LIME1-203ENST00000465591 POLR3GO15318 223 aaPredicted RBP19.35■□□□□ 0.69
LIME1-203ENST00000465591 CYTIPO60759 359 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 TGDSO95455 350 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 BCHEP06276 602 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 FESP07332 822 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 YES1P07947 543 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 NUDT7P0C024 238 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 CD53P19397 219 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 APOBEC1P41238 236 aaKnown RBP19.35■□□□□ 0.69
LIME1-203ENST00000465591 AQP5P55064 265 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 DSTNP60981 165 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 KEAP1Q14145 624 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 STK32CQ86UX6 486 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 CXorf67Q86X51 503 aaPredicted RBP19.35■□□□□ 0.69
LIME1-203ENST00000465591 VRK2Q86Y07 508 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 CMIPQ8IY22 773 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 GABRG1Q8N1C3 465 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 SLC43A2Q8N370 569 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 SLC38A5Q8WUX1 472 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 ACTR6Q9GZN1 396 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 BCO1Q9HAY6 547 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 SLC52A3Q9NQ40 469 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 ZNF446Q9NWS9 450 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 P2RX2Q9UBL9 471 aa19.35■□□□□ 0.69
LIME1-203ENST00000465591 FLNAP21333 2647 aaKnown RBP19.35■□□□□ 0.69
LIME1-203ENST00000465591 C2CD3Q4AC94 2353 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 ZNF814B7Z6K7 855 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 SULT2B1O00204 365 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 KLF4O43474 513 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 DBIP07108 87 aaKnown RBP19.34■□□□□ 0.69
LIME1-203ENST00000465591 TFPIP10646 304 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 IL7RP16871 459 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 CCNA2P20248 432 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 PSMB1P20618 241 aaKnown RBP19.34■□□□□ 0.69
LIME1-203ENST00000465591 MAGEA8P43361 318 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 RASGEF1BQ0VAM2 473 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 DEFB113Q30KQ7 82 aa19.34■□□□□ 0.69
LIME1-203ENST00000465591 ZNF836Q6ZNA1 936 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms