RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ART3Q13508 389 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 INTS11Q5TA45 600 aaKnown RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 C3orf33Q6P1S2 294 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 PLXDC2Q6UX71 529 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 PATL1Q86TB9 770 aaKnown RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 ARMC8Q8IUR7 673 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 CCDC71Q8IV32 467 aaPredicted RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 FITM2Q8N6M3 262 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 OR2V1Q8NHB1 315 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 SDCCAG3Q96C92 435 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 ZNF845Q96IR2 970 aaPredicted RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 PINK1Q9BXM7 581 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 ADAM19Q9H013 955 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 COQ10BQ9H8M1 238 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 COQ3Q9NZJ6 369 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 GJE1A6NN92 205 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 HSPB2A8KAH6 182 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 M0QX08 132 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 TGM6O95932 706 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 HTR3AP46098 478 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 SLC7A2P52569 658 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 ZNF136P52737 540 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 KRT72Q14CN4 511 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 HSPB2Q16082 182 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 POMZP3Q6PJE2 187 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 ADGRG3Q86Y34 549 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 OR2T12Q8NG77 320 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 OR10D3Q8NH80 312 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 TAMM41Q96BW9 452 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 ZFP3Q96NJ6 502 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 TM9SF2Q99805 663 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 PAQR5Q9NXK6 330 aaPredicted RBP18.25■□□□□ 0.51
SKA3-205ENST00000465471 TAGLN3Q9UI15 199 aa18.25■□□□□ 0.51
SKA3-205ENST00000465471 KLF2Q9Y5W3 355 aaPredicted RBP18.25■□□□□ 0.51
SKA3-205ENST00000465471 SLC22A20A6NK97 555 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 SYT5O00445 386 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 TNFSF11O14788 317 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 FRS3O43559 492 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 RCBTB2O95199 551 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 CLDN14O95500 239 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 IL2RAP01589 272 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 OPN1LWP04000 364 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 CD247P20963 164 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 SFTPDP35247 375 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 CPA2P48052 419 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 KCNJ5P48544 419 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 WBP2NLQ6ICG8 309 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 MICU2Q8IYU8 434 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 GPR32P1Q8NGA4 272 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 OR10Q1Q8NGQ4 319 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 LILRB4Q8NHJ6 448 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 SLC25A43Q8WUT9 341 aaPredicted RBP18.24■□□□□ 0.51
SKA3-205ENST00000465471 FIG4Q92562 907 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 EVA1AQ9H8M9 152 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 SERINC1Q9NRX5 453 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 GMPR2Q9P2T1 348 aaKnown RBP18.24■□□□□ 0.51
SKA3-205ENST00000465471 CHRNA9Q9UGM1 479 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 OSGIN1Q9UJX0 560 aa18.24■□□□□ 0.51
SKA3-205ENST00000465471 INTS1Q8N201 2190 aaKnown RBP18.24■□□□□ 0.51
SKA3-205ENST00000465471 OPN1SWP03999 348 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 C8BP07358 591 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 EIF1AXP47813 144 aaKnown RBP18.23■□□□□ 0.51
SKA3-205ENST00000465471 POLR2HP52434 150 aaKnown RBP18.23■□□□□ 0.51
SKA3-205ENST00000465471 PSME3P61289 254 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 LIPEQ05469 1076 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 PON3Q15166 354 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 DUSP7Q16829 419 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 TMEM176BQ3YBM2 270 aaPredicted RBP18.23■□□□□ 0.51
SKA3-205ENST00000465471 SYT14P1Q58G82 188 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 HBMQ6B0K9 141 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 CHMP1BQ7LBR1 199 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 MAMDC2Q7Z304 686 aaPredicted RBP18.23■□□□□ 0.51
SKA3-205ENST00000465471 LIX1LQ8IVB5 337 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 SMYD1Q8NB12 490 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 FNDC9Q8TBE3 224 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 WFDC6Q9BQY6 131 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 RNF122Q9H9V4 155 aa18.23■□□□□ 0.51
SKA3-205ENST00000465471 ELOVL7A1L3X0 281 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 A1L4Q6 167 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 TMEM229AB2RXF0 380 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 NDUFAB1O14561 156 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 CXCL13O43927 109 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 LGI1O95970 557 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 FKBP2P26885 142 aaKnown RBP18.22■□□□□ 0.51
SKA3-205ENST00000465471 HTR2AP28223 471 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 TACR3P29371 465 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 MAP2K6P52564 334 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 HOXC5Q00444 222 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 GUSBP1Q15486 140 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 NRF1Q16656 503 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 PDSS1Q5T2R2 415 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 LSMEM1Q8N8F7 131 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 BCAS4Q8TDM0 211 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 CA5BP1Q8WTZ4 195 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 C3orf49Q96BT1 292 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 ARHGDIGQ99819 225 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 SRXN1Q9BYN0 137 aa18.22■□□□□ 0.51
SKA3-205ENST00000465471 ALG2Q9H553 416 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms