RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 NDUFB11Q9NX14 153 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 IL20RAQ9UHF4 553 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 STUB1Q9UNE7 303 aa19.97■□□□□ 0.79
PDLIM2-216ENST00000464275 C2orf92A0A1B0GVN3 265 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 HCN1O60741 890 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 SAGP10523 405 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 FUT1P19526 365 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 LCN1P31025 176 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 HOXD12P35452 270 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 GPR143P51810 404 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 CDH11P55287 796 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 FNDC7Q5VTL7 733 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 NXNL2Q5VZ03 156 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 SMARCD3Q6STE5 483 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 NCCRP1Q6ZVX7 275 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 PRSS58Q8IYP2 241 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 FAM71CQ8NEG0 241 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 DNAJA4Q8WW22 397 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 HPS1Q92902 700 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 INIPQ9NRY2 104 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 SIGLEC7Q9Y286 467 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 MPDZO75970 2070 aa19.96■□□□□ 0.79
PDLIM2-216ENST00000464275 IGHV5-10-1A0A0J9YXX1 117 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 BHLHE40O14503 412 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 PRKNO60260 465 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 PTP4A3O75365 173 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 RFPL3O75679 317 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 HPGDP15428 266 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 NDUFAF6Q330K2 333 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 HLA-DQA1Q5Y7H0 255 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 LAPTM4BQ86VI4 370 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 LNX2Q8N448 690 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 OR13C2Q8NGS9 318 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 CEP76Q8TAP6 659 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 OR6C1Q96RD1 312 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC30A2Q9BRI3 323 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 FN3KQ9H479 309 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 POLE4Q9NR33 117 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 H2AFY2Q9P0M6 372 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 ASCC3Q8N3C0 2202 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 SCDO00767 359 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 GPX5O75715 221 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 UTS2O95399 124 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 DLGAP3O95886 979 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 MYL12AP19105 171 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 EBPQ15125 230 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC43A2Q8N370 569 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 OR1N1Q8NGS0 311 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 WDFY2Q96P53 400 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 RNF167Q9H6Y7 350 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 COPS7AQ9UBW8 275 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 CTSFQ9UBX1 484 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 RARRES3Q9UL19 164 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 EXOSC1Q9Y3B2 195 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 TECTAO75443 2155 aa19.95■□□□□ 0.78
PDLIM2-216ENST00000464275 OR6C76A6NM76 312 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ZNF670-ZNF695F2Z2N8 137 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ETV5P41161 510 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ETV1P50549 477 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SOWAHCQ53LP3 525 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 TMCO6Q96DC7 493 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 CCDC74BQ96LY2 380 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 GAL3ST4Q96RP7 486 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 CCNL2Q96S94 520 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ASPNQ9BXN1 380 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SYNDIG1Q9H7V2 258 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SMURF1Q9HCE7 757 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ISYNA1Q9NPH2 558 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 EXOSC3Q9NQT5 275 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC22A11Q9NSA0 550 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ICAM5Q9UMF0 924 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 BAIAP2Q9UQB8 552 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 IGLV3-12A0A075B6K2 115 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 TO15178 435 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC2A10O95528 541 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 NGFRP08138 427 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 UBL4AP11441 157 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 HTR1FP30939 366 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 RORCP51449 518 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 DOC2BQ14184 412 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 CXXC5Q7LFL8 322 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC29A4Q7RTT9 530 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 AKAP14Q86UN6 197 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 C9orf40Q8IXQ3 194 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 ENKD1Q9H0I2 346 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 HINT3Q9NQE9 182 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 NPAP1Q9NZP6 1156 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 SSR3Q9UNL2 185 aa19.94■□□□□ 0.78
PDLIM2-216ENST00000464275 EXPH5Q8NEV8 1989 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 A0A087WUJ7 227 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 SLC35F4A4IF30 521 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 FAM86C2PA6NEL3 165 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 SNPHO15079 494 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 CER1O95813 267 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 HBQ1P09105 142 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 RUNX1T1Q06455 604 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 CRYZQ08257 329 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 PAQR6Q6TCH4 344 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 CPOQ8IVL8 374 aa19.93■□□□□ 0.78
PDLIM2-216ENST00000464275 GID4Q8IVV7 300 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms