RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 CHRFAM7AQ494W8 412 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 ATP6AP1LQ52LC2 224 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 C11orf71Q6IPW1 123 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 OLIG3Q7RTU3 272 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 CACNG6Q9BXT2 260 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 BHLHE41Q9C0J9 482 aaPredicted RBP19.94■□□□□ 0.78
USP4-208ENST00000464168 SERINC1Q9NRX5 453 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 ACER3Q9NUN7 267 aa19.94■□□□□ 0.78
USP4-208ENST00000464168 SULT2B1O00204 365 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 IGHV3-9P01782 118 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 ARRB2P32121 409 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 TTKP33981 857 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 PDK3Q15120 406 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 SYT14P1Q58G82 188 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 FBXW9Q5XUX1 488 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 ABLIM2Q6H8Q1 611 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 BHLHB9Q6PI77 547 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 MTDHQ86UE4 582 aaKnown RBP19.93■□□□□ 0.78
USP4-208ENST00000464168 FNDC5Q8NAU1 212 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 KIF18AQ8NI77 898 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 ADAD1Q96M93 576 aaKnown RBP19.93■□□□□ 0.78
USP4-208ENST00000464168 DUSP26Q9BV47 211 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 MKS1Q9NXB0 559 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 MKLN1Q9UL63 735 aa19.93■□□□□ 0.78
USP4-208ENST00000464168 FAM234BA2RU67 622 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 DUXAA6NLW8 204 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 STX11O75558 287 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 RAD51DO75771 328 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 UGT2B17O75795 530 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 CSTAP01040 98 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 UBTFL6P0CB48 400 aaPredicted RBP19.92■□□□□ 0.78
USP4-208ENST00000464168 MATN1P21941 496 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 NTF4P34130 210 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 NUDT6P53370 316 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 CSNK2A1P68400 391 aaPredicted RBP19.92■□□□□ 0.78
USP4-208ENST00000464168 TMEM108Q6UXF1 575 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 ZCCHC23Q6ZST2 131 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 C6orf120Q7Z4R8 191 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 CLEC4FQ8N1N0 589 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
USP4-208ENST00000464168 EIF1ADQ8N9N8 165 aaKnown RBP19.92■□□□□ 0.78
USP4-208ENST00000464168 TMEM234Q8WY98 164 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 APOPT1Q96IL0 206 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 DHRS9Q9BPW9 319 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 EMC3Q9P0I2 261 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 SLC17A7Q9P2U7 560 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 SLC25A15Q9Y619 301 aa19.92■□□□□ 0.78
USP4-208ENST00000464168 ZNF716A6NP11 495 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 AK1P00568 194 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 PGCP20142 388 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 SOAT1P35610 550 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 ZNF83P51522 516 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 SPOCK1Q08629 439 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 MAPK14Q16539 360 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 ARHGAP11BQ3KRB8 267 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 C6orf52Q5T4I8 152 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 EIF3MQ7L2H7 374 aaKnown RBP19.91■□□□□ 0.78
USP4-208ENST00000464168 UBE2J2Q8N2K1 259 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 OR52N5Q8NH56 324 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 SLC25A43Q8WUT9 341 aaPredicted RBP19.91■□□□□ 0.78
USP4-208ENST00000464168 TMEM158Q8WZ71 300 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 TNFRSF13CQ96RJ3 184 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 CCDC106Q9BWC9 280 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 ZNF350Q9GZX5 532 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 CBLN4Q9NTU7 201 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 ZDHHC2Q9UIJ5 367 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 MGAT4BQ9UQ53 548 aa19.91■□□□□ 0.78
USP4-208ENST00000464168 NOSIPQ9Y314 301 aaKnown RBP19.91■□□□□ 0.78
USP4-208ENST00000464168 CIB4A0PJX0 185 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 BCAS1O75363 584 aaPredicted RBP19.9■□□□□ 0.78
USP4-208ENST00000464168 G6PDP11413 515 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 PTAFRP25105 342 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 CD40P25942 277 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 DSCR9P59020 149 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 CHRNEQ04844 493 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 TMEM249Q2WGJ8 235 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 PGS1Q32NB8 556 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 SLC22A25Q6T423 547 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 CLEC2AQ6UVW9 174 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 CLECL1Q8IZS7 167 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 NANOS1Q8WY41 292 aaKnown RBP19.9■□□□□ 0.78
USP4-208ENST00000464168 HTRA1Q92743 480 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 APH1AQ96BI3 265 aa19.9■□□□□ 0.78
USP4-208ENST00000464168 A0A1W2PR80 420 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 TLDC2A0PJX2 215 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 ELOA3DA6NLF2 546 aaPredicted RBP19.89■□□□□ 0.77
USP4-208ENST00000464168 CCT8L1PA6NM43 557 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 SKAP2O75563 359 aaPredicted RBP19.89■□□□□ 0.77
USP4-208ENST00000464168 FAM157CP0CG43 387 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 TFPIP10646 304 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 PGM1P36871 562 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 APOBEC1P41238 236 aaKnown RBP19.89■□□□□ 0.77
USP4-208ENST00000464168 LOXL1Q08397 574 aaPredicted RBP19.89■□□□□ 0.77
USP4-208ENST00000464168 ELOA3BQ3SY89 546 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 KLHL17Q6TDP4 642 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 B3GLCTQ6Y288 498 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 FBXL14Q8N1E6 418 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 MUC15Q8N387 334 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 FAM71CQ8NEG0 241 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 ELOA3Q8NG57 546 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms