RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TMEM176BQ3YBM2 270 aaPredicted RBP15.86■□□□□ 0.13
VPS52-214ENST00000463486 ZNF311Q5JNZ3 666 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 ZNF787Q6DD87 383 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 C8orf82Q6P1X6 216 aaPredicted RBP15.86■□□□□ 0.13
VPS52-214ENST00000463486 CPLX4Q7Z7G2 160 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 OR8J3Q8NGG0 315 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 OR10A6Q8NH74 314 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 TMEM234Q8WY98 164 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 OSTF1Q92882 214 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 INTS12Q96CB8 462 aaKnown RBP15.86■□□□□ 0.13
VPS52-214ENST00000463486 RCN3Q96D15 328 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 ZFP3Q96NJ6 502 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 GPATCH1Q9BRR8 931 aaKnown RBP15.86■□□□□ 0.13
VPS52-214ENST00000463486 ENKD1Q9H0I2 346 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 CHST11Q9NPF2 352 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 KCNJ16Q9NPI9 418 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 CTPS2Q9NRF8 586 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 STOML1Q9UBI4 398 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 PRDM4Q9UKN5 801 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 ZNF232Q9UNY5 417 aa15.86■□□□□ 0.13
VPS52-214ENST00000463486 ANKHD1Q8IWZ3 2542 aaKnown RBP15.86■□□□□ 0.13
VPS52-214ENST00000463486 TMIGD3P0DMS9 266 aaPredicted RBP15.85■□□□□ 0.13
VPS52-214ENST00000463486 BMP5P22003 454 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 ME2P23368 584 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 PRKAR1BP31321 381 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 SFTPDP35247 375 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 APOBEC1P41238 236 aaKnown RBP15.85■□□□□ 0.13
VPS52-214ENST00000463486 SLC1A3P43003 542 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 EIF1AXP47813 144 aaKnown RBP15.85■□□□□ 0.13
VPS52-214ENST00000463486 AGFG1P52594 562 aaKnown RBP15.85■□□□□ 0.13
VPS52-214ENST00000463486 CRYBA2P53672 197 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 SELENBP1Q13228 472 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 GLIPR1L2Q4G1C9 344 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 HBMQ6B0K9 141 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 DHRS4L2Q6PKH6 230 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 GRINAQ7Z429 371 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 ZNF440Q8IYI8 595 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 GCNT2Q8N0V5 402 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 C11orf65Q8NCR3 313 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 HIPK4Q8NE63 616 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 SLC35B4Q969S0 331 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 ZNF583Q96ND8 569 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 WFDC6Q9BQY6 131 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 SRXN1Q9BYN0 137 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 LRBAP50851 2863 aa15.85■□□□□ 0.13
VPS52-214ENST00000463486 TEX15Q9BXT5 2789 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 A0A1W2PNV4 684 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 SYT5O00445 386 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 FRS3O43559 492 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 MFN2O95140 757 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 CRHP06850 196 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 AQP1P29972 269 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 KIR2DL2P43627 348 aaPredicted RBP15.84■□□□□ 0.13
VPS52-214ENST00000463486 CARD18P57730 90 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 DMTNQ08495 405 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 CYP51A1Q16850 503 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 FBXL19-AS1Q494R0 122 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 MMEL1Q495T6 779 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 CHMP1BQ7LBR1 199 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 PCYOX1LQ8NBM8 494 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 STARD4Q96DR4 205 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 NSRP1Q9H0G5 558 aaKnown RBP15.84■□□□□ 0.13
VPS52-214ENST00000463486 PAQR5Q9NXK6 330 aaPredicted RBP15.84■□□□□ 0.13
VPS52-214ENST00000463486 OSGIN1Q9UJX0 560 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 USP22Q9UPT9 525 aa15.84■□□□□ 0.13
VPS52-214ENST00000463486 DVL2O14641 736 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 CGAP01215 116 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 TACR3P29371 465 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 PCGF2P35227 344 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 OPRM1P35372 400 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 HOXC5Q00444 222 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 SGCBQ16585 318 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 VMACQ2NL98 169 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 OR2A2Q6IF42 318 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 C3orf33Q6P1S2 294 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 ATP6V1C2Q8NEY4 427 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 ZNF563Q8TA94 476 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 SH3GL1Q99961 368 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 SPOCK3Q9BQ16 436 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 SFXN3Q9BWM7 321 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 PIF1Q9H611 641 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 CMTM6Q9NX76 183 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 CHRNA9Q9UGM1 479 aa15.83■□□□□ 0.12
VPS52-214ENST00000463486 ING1Q9UK53 422 aaPredicted RBP15.83■□□□□ 0.12
VPS52-214ENST00000463486 A0A1W2PNR3 127 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 GJE1A6NN92 205 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 TMEM229AB2RXF0 380 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 M0QX08 132 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 TPST2O60704 377 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 SHOX2O60902 331 aaPredicted RBP15.82■□□□□ 0.12
VPS52-214ENST00000463486 KLK2P20151 261 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 HTR3AP46098 478 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 RAC3P60763 192 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 ZNF239Q16600 458 aaKnown RBP15.82■□□□□ 0.12
VPS52-214ENST00000463486 DUSP7Q16829 419 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 SYT14P1Q58G82 188 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 CCDC80Q76M96 950 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 ZNF550Q7Z398 422 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 KRT73Q86Y46 540 aa15.82■□□□□ 0.12
VPS52-214ENST00000463486 SLC15A3Q8IY34 581 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms