RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 ESRRGP62508 458 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 NPRL3Q12980 569 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 STX1AQ16623 288 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 CYBRD1Q53TN4 286 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 Q5VSD8 79 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 KRT80Q6KB66 452 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 CD164L2Q6UWJ8 174 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 ZNF620Q6ZNG0 422 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 C1orf122Q6ZSJ8 110 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 FAM92BQ6ZTR7 304 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 PRPF39Q86UA1 669 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 KLHDC8AQ8IYD2 350 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 ACBD4Q8NC06 268 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 OR10G9Q8NGN4 311 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 SLC5A11Q8WWX8 675 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 MRPS27Q92552 414 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 PKMYT1Q99640 499 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 SDF4Q9BRK5 362 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 NAA11Q9BSU3 229 aaPredicted RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 PARP11Q9NR21 331 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 CCL28Q9NRJ3 127 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 DDX28Q9NUL7 540 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 GALPQ9UBC7 116 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 MRPS33Q9Y291 106 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 KLHDC2Q9Y2U9 406 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 EXOSC1Q9Y3B2 195 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 SMARCA4P51532 1647 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 PKHD1P08F94 4074 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 PKD1L1Q8TDX9 2849 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 ITIH6Q6UXX5 1313 aa-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 UTP20O75691 2785 aaKnown RBP-0.4□□□□□ -2.47
TMEM56-204ENST00000463375 SRCAPQ6ZRS2 3230 aa-0.41□□□□□ -2.47
TMEM56-204ENST00000463375 MUC17Q685J3 4493 aa-0.41□□□□□ -2.47
TMEM56-204ENST00000463375 NBEAQ8NFP9 2946 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 A0A0G2JRQ6 117 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 TMEM269A0A1B0GVZ9 245 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 TMEM223A0PJW6 202 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 PLAC8L1A1L4L8 177 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 E9PBE3 544 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ARPC1BO15143 372 aaKnown RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 RAD51DO75771 328 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SLC16A8O95907 504 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ALPPP05187 535 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 GSTA1P08263 222 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 MT1HL1P0DM35 61 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 B4GALT1P15291 398 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 OMGP23515 440 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 FCARP24071 287 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 CCND3P30281 292 aaPredicted RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ACADSBP45954 432 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ERFP50548 548 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ZNF83P51522 516 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SGSHP51688 502 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 CLNS1AP54105 237 aaKnown RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 RPL8P62917 257 aaKnown RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 EPC2Q52LR7 807 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 C1orf100Q5SVJ3 147 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 C4orf50Q6ZRC1 276 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 NTM-AS1Q6ZSK4 140 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SPATA21Q7Z572 469 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ADCK2Q7Z695 626 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 NT5DC3Q86UY8 548 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 AQP12AQ8IXF9 295 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 BATF2Q8N1L9 274 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 DEFB119Q8N690 84 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ST20-AS1Q8NBB2 130 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 TSPAN18Q96SJ8 248 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ZNF607Q96SK3 696 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 TIMM29Q9BSF4 260 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ST6GALNAC4Q9H4F1 302 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 TMEM106BQ9NUM4 274 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 KLHL28Q9NXS3 571 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SMPD3Q9NY59 655 aaPredicted RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 KIF25Q9UIL4 384 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 APPL1Q9UKG1 709 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 GPR34Q9UPC5 381 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SIGLEC7Q9Y286 467 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 PLLPQ9Y342 182 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 DNAH3Q8TD57 4116 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 SLX4Q8IY92 1834 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 DMXL1Q9Y485 3027 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 MYCBP2O75592 4640 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 CSMD1Q96PZ7 3565 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 ANK2Q01484 3957 aa-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 MN1Q10571 1320 aaPredicted RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 CENPJQ9HC77 1338 aaPredicted RBP-0.41□□□□□ -2.48
TMEM56-204ENST00000463375 NSD2O96028 1365 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 SDK1Q7Z5N4 2213 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 TLN1Q9Y490 2541 aaKnown RBP-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 A0A1B0GUL7 405 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 HTR3EA5X5Y0 456 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 IDSB3KWA1 339 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 TRIM3O75382 744 aaPredicted RBP-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 CCNE2O96020 404 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 MT1BP07438 61 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 SERPINF2P08697 491 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 NPR2P20594 1047 aa-0.42□□□□□ -2.48
TMEM56-204ENST00000463375 STIP1P31948 543 aaKnown RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms