RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 YARS2Q9Y2Z4 477 aaKnown RBP11.74□□□□□ -0.53
VAPB-203ENST00000463370 MYL12AP19105 171 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 UGT2B10P36537 528 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 CRYBB2P43320 205 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 SERPINB10P48595 397 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 MLLT11Q13015 90 aaPredicted RBP11.73□□□□□ -0.53
VAPB-203ENST00000463370 NIPAL3Q6P499 406 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 USP43Q70EL4 1123 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 MARCH3Q86UD3 253 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 SNX29P2Q8IUI4 249 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 PHC2Q8IXK0 858 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 TMCO5AQ8N6Q1 288 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 ZFP41Q8N8Y5 198 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 ZNF485Q8NCK3 441 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 PLPP5Q8NEB5 264 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 OR6Q1Q8NGQ2 317 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
VAPB-203ENST00000463370 KISS1RQ969F8 398 aaPredicted RBP11.73□□□□□ -0.53
VAPB-203ENST00000463370 CMC2Q9NRP2 79 aa11.73□□□□□ -0.53
VAPB-203ENST00000463370 IGLV3-12A0A075B6K2 115 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SNTNA6NMZ2 147 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 IDSB3KWA1 339 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 HCN1O60741 890 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 BMP4P12644 408 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ABCD3P28288 659 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ADH7P40394 386 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SLC1A3P43003 542 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 WNT4P56705 351 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 COPZ1P61923 177 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF117Q03924 483 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 CRMP1Q14194 572 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 PHF19Q5T6S3 580 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 RABEPKQ7Z6M1 372 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 MFSD4AQ8N468 514 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF441Q8N8Z8 693 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF527Q8NB42 609 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 OR51G2Q8NGK0 314 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SMAP2Q8WU79 429 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 RFKQ969G6 155 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 BORCS5Q969J3 196 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 TMEM203Q969S6 136 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZC3H10Q96K80 434 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 CDADC1Q9BWV3 514 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 GTPBP2Q9BX10 602 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 TGIF2Q9GZN2 237 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 NDUFB11Q9NX14 153 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 COPS7AQ9UBW8 275 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 CFL2Q9Y281 166 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ADAMTS9Q9P2N4 1935 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 MCIDASD6RGH6 385 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 J3QRE1 110 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF264O43296 627 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 TSPAN2O60636 221 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF354AO60765 605 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 GYPBP06028 91 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ENDOUP21128 410 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 PLCXD2Q0VAA5 305 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 TOMM34Q15785 309 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 KLHL12Q53G59 568 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ZNF385CQ66K41 422 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 SLC37A3Q8NCC5 494 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 OR5M3Q8NGP4 307 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 OMA1Q96E52 524 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SECISBP2Q96T21 854 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 HOXD1Q9GZZ0 328 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 RACGAP1Q9H0H5 632 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 RERGLQ9H628 205 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 RARRES3Q9UL19 164 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 ICAM5Q9UMF0 924 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 ADAM18Q9Y3Q7 739 aa11.72□□□□□ -0.53
VAPB-203ENST00000463370 SPIN1Q9Y657 262 aaPredicted RBP11.72□□□□□ -0.53
VAPB-203ENST00000463370 TMEM129A0AVI4 362 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
VAPB-203ENST00000463370 IMPA2O14732 288 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 IL12BP29460 328 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 C1DQ13901 141 aaKnown RBP11.71□□□□□ -0.53
VAPB-203ENST00000463370 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 TCEAL6Q6IPX3 200 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 RPL13AP3Q6NVV1 102 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 ANKRD37Q7Z713 158 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 ATG4DQ86TL0 474 aaPredicted RBP11.71□□□□□ -0.53
VAPB-203ENST00000463370 SLITRK4Q8IW52 837 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 APCDD1LQ8NCL9 501 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 THAP3Q8WTV1 239 aaPredicted RBP11.71□□□□□ -0.53
VAPB-203ENST00000463370 DNAJA4Q8WW22 397 aaPredicted RBP11.71□□□□□ -0.53
VAPB-203ENST00000463370 NAT6Q93015 286 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 TCEAL3Q969E4 200 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 SGTBQ96EQ0 304 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 OR51V1Q9H2C8 321 aa11.71□□□□□ -0.53
VAPB-203ENST00000463370 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 CCDC182A6NF36 153 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 KHNYNO15037 678 aaKnown RBP11.71□□□□□ -0.54
VAPB-203ENST00000463370 IGHA1P01876 353 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms