RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CLRN3Q8NCR9 226 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 CSNK2A3Q8NEV1 391 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 OR6M1Q8NGM8 313 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 ZNF480Q8WV37 535 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 TMEM234Q8WY98 164 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 ZNF443Q9Y2A4 671 aaPredicted RBP14.78□□□□□ -0.04
SMC4-204ENST00000462787 FAM230AA0A1W2PPH8 454 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SLC22A23A1A5C7 686 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 GABARAPH6UMI1 98 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SSX4O60224 188 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 CLEC3AO75596 197 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 IDH3GP51553 393 aaPredicted RBP14.78□□□□□ -0.04
SMC4-204ENST00000462787 HOXC5Q00444 222 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 GALK2Q01415 458 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SSX9Q7RTT3 188 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 VRK2Q86Y07 508 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 OR7D2Q96RA2 312 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SLC38A3Q99624 504 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SLC19A3Q9BZV2 496 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 LRFN1Q9P244 771 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 ADAM29Q9UKF5 820 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 NME7Q9Y5B8 376 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 TSPAN11A1L157 253 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 ZNF850A8MQ14 1090 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 SOD2P04179 222 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 INHAP05111 366 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 GYPBP06028 91 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 GJA5P36382 358 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 BAMBIQ13145 260 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 NUDT8Q8WV74 236 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 MYADMQ96S97 322 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 CNTNAP3Q9BZ76 1288 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 IGFLR1Q9H665 355 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 NDRG3Q9UGV2 375 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 OR1A2Q9Y585 309 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 AGAP14A8MT82 685 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 IFNGR1P15260 489 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 HOXD9P28356 352 aaPredicted RBP14.78□□□□□ -0.04
SMC4-204ENST00000462787 PPA1Q15181 289 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 PRSS36Q5K4E3 855 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 H3F3CQ6NXT2 135 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 C17orf107Q6ZR85 190 aa14.78□□□□□ -0.04
SMC4-204ENST00000462787 USP36Q9P275 1121 aaKnown RBP14.78□□□□□ -0.04
SMC4-204ENST00000462787 GOLGA4Q13439 2230 aaKnown RBP14.78□□□□□ -0.04
SMC4-204ENST00000462787 DCDC2BA2VCK2 349 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 SLC33A1O00400 549 aaPredicted RBP14.77□□□□□ -0.04
SMC4-204ENST00000462787 IMPA2O14732 288 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 TPBGQ13641 420 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 BPHLQ86WA6 291 aaPredicted RBP14.77□□□□□ -0.04
SMC4-204ENST00000462787 PLA2G15Q8NCC3 412 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 PXYLP1Q8TE99 480 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 CRB3Q9BUF7 120 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 SLC6A20Q9NP91 592 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 PRTFDC1Q9NRG1 225 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 SLC23A1Q9UHI7 598 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 SLC6A14Q9UN76 642 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 PKD1L3Q7Z443 1732 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 A0A1W2PS29 197 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 KIAA0355O15063 1070 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 HCRTR2O43614 444 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 CD53P19397 219 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 GATSQ8NAP1 163 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 ST8SIA2Q92186 375 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 SLC25A21Q9BQT8 299 aaPredicted RBP14.77□□□□□ -0.04
SMC4-204ENST00000462787 NARFLQ9H6Q4 476 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 MAFFQ9ULX9 164 aa14.77□□□□□ -0.04
SMC4-204ENST00000462787 DNAJC25-GNG10A0A024R161 153 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 PRR35P0CG20 571 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 MMP11P24347 488 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 BLKP51451 505 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 SIM1P81133 766 aaPredicted RBP14.77□□□□□ -0.05
SMC4-204ENST00000462787 PUS10Q3MIT2 529 aaKnown RBP14.77□□□□□ -0.05
SMC4-204ENST00000462787 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.05
SMC4-204ENST00000462787 COMTD1Q86VU5 262 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 PLAC1Q9HBJ0 212 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 PPP4R1LQ9P1A2 415 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 ZNF629Q9UEG4 869 aaPredicted RBP14.77□□□□□ -0.05
SMC4-204ENST00000462787 CD70P32970 193 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 PPT1P50897 306 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 AFF3P51826 1226 aaKnown RBP14.77□□□□□ -0.05
SMC4-204ENST00000462787 PDZK1IP1Q13113 114 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 LURAP1Q96LR2 239 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 LHX3Q9UBR4 397 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 SCML1Q9UN30 329 aa14.77□□□□□ -0.05
SMC4-204ENST00000462787 FAM171A2A8MVW0 826 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 ZDHHC11BP0C7U3 371 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 HEPHL1Q6MZM0 1159 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 PAPD4Q6PIY7 484 aaKnown RBP14.76□□□□□ -0.05
SMC4-204ENST00000462787 OR4N5Q8IXE1 308 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 OR1M1Q8NGA1 313 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 LINC01599Q8WXQ3 324 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 SLCO5A1Q9H2Y9 848 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 CXorf36Q9H7Y0 433 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 PNMTP11086 282 aa14.76□□□□□ -0.05
SMC4-204ENST00000462787 LIPCP11150 499 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms