RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 SESN3P58005 492 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 DSTNP60981 165 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 SELENBP1Q13228 472 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 GNA13Q14344 377 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 RGNQ15493 299 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 VWA1Q6PCB0 445 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 FAM214BQ7L5A3 538 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 BTLAQ7Z6A9 289 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 LUZP2Q86TE4 346 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 ARFGAP2Q8N6H7 521 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 CNEP1R1Q8N9A8 125 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 SLC38A5Q8WUX1 472 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 PRRG4Q9BZD6 226 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 RAD21L1Q9H4I0 556 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 NPHS2Q9NP85 383 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 TIGARQ9NQ88 270 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 PRDM4Q9UKN5 801 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 ARID1AO14497 2285 aa16.45■□□□□ 0.22
COL9A2-205ENST00000461118 TLN2Q9Y4G6 2542 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 A0A1W2PP18 115 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 CLDN24A6NM45 220 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 HEXAP06865 529 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 DBIP07108 87 aaKnown RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 IL7RP16871 459 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 SFTPDP35247 375 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 CRISP3P54108 245 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 FADDQ13158 208 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 TMEM176BQ3YBM2 270 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 AGKQ53H12 422 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 PAGE3Q5JUK9 113 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 METTL21CQ5VZV1 264 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 CNOT9Q92600 299 aaKnown RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 THOC1Q96FV9 657 aaKnown RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 GMPPAQ96IJ6 420 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-205ENST00000461118 GALNT8Q9NY28 637 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 SLC25A37Q9NYZ2 338 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 SLAMF8Q9P0V8 285 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 DCTN4Q9UJW0 460 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 TRIM33Q9UPN9 1127 aa16.44■□□□□ 0.22
COL9A2-205ENST00000461118 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 HNRNPCL2B2RXH8 293 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 NR5A2O00482 541 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 HNRNPCL1O60812 293 aaKnown RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 SS18L1O75177 396 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 GOSR1O95249 250 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PABPC4LP0CB38 370 aaKnown RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 NCF2P19878 526 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 ADSLP30566 484 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 APOBEC1P41238 236 aaKnown RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 CPA2P48052 419 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 ZNF239Q16600 458 aaKnown RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 GTF2IRD2BQ6EKJ0 949 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 CLEC9AQ6UXN8 241 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PLEKHM3Q6ZWE6 761 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 GTF2IRD2Q86UP8 949 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 MSRB3Q8IXL7 192 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PEX5LQ8IYB4 626 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 WDR60Q8WVS4 1066 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 MDFIQ99750 246 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 CCDC106Q9BWC9 280 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 COQ10BQ9H8M1 238 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 PLSCR4Q9NRQ2 329 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 SERINC1Q9NRX5 453 aa16.43■□□□□ 0.22
COL9A2-205ENST00000461118 BEX4Q9NWD9 120 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-205ENST00000461118 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 TRBV5-3A0A0A0MS03 114 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 TMEM247A6NEH6 219 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 FAAHO00519 579 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 ADAM11O75078 769 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 SMNDC1O75940 238 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL9A2-205ENST00000461118 BCHEP06276 602 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 PPIBP23284 216 aaKnown RBP16.42■□□□□ 0.22
COL9A2-205ENST00000461118 FKBP2P26885 142 aaKnown RBP16.42■□□□□ 0.22
COL9A2-205ENST00000461118 RAC3P60763 192 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 SIRPAP78324 504 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 NKX6-1P78426 367 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-205ENST00000461118 MERTKQ12866 999 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 ZSWIM7Q19AV6 140 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 ZNF474Q6S9Z5 364 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-205ENST00000461118 GRINAQ7Z429 371 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 RNF128Q8TEB7 428 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 TSPEARQ8WU66 669 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 TMEM19Q96HH6 336 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 SRXN1Q9BYN0 137 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 BCL2L10Q9HD36 194 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 A4GALTQ9NPC4 353 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 MED4Q9NPJ6 270 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 ELOVL5Q9NYP7 299 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 EMC9Q9Y3B6 208 aa16.42■□□□□ 0.22
COL9A2-205ENST00000461118 A0A0G2JND7 137 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms