RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PGK1P00558 417 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 IGHV3-23P01764 117 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 IQCF3P0C7M6 154 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 GCFC2P16383 781 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 CD80P33681 288 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 PLA2G16P53816 162 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 HSD17B7P56937 341 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 NUCB2P80303 420 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 MRPS11P82912 194 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 PJVKQ0ZLH3 352 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 RAB40BQ12829 278 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 IDI1Q13907 227 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 SELPLGQ14242 412 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 TAF7Q15545 349 aaPredicted RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 NDUFA9Q16795 377 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 NADK2Q4G0N4 442 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 C9orf129Q5T035 196 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 METTL11BQ5VVY1 283 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 ZBED8Q8IZ13 594 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 GMCL1P1Q8NEA9 526 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 TRUB1Q8WWH5 349 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 MYLPFQ96A32 169 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 HAVCR1Q96D42 359 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 VPS39Q96JC1 886 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 SERAC1Q96JX3 654 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 SLC6A7Q99884 636 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 FARSBQ9NSD9 589 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.44□□□□□ -2.02
RFC4-211ENST00000460408 KLHL21Q9UJP4 597 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 CLEC4EQ9ULY5 219 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 PDE10AQ9Y233 779 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 OARD1Q9Y530 152 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 NALCNQ8IZF0 1738 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 KANK1Q14678 1352 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 PXDNQ92626 1479 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 TNRC6CQ9HCJ0 1690 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 PIEZO1Q92508 2521 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 CICQ96RK0 1608 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 CEP152O94986 1710 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 A0A1W2PNV4 684 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 EPOPA6NHQ4 379 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 B4DXG7 233 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 H3BMQ9 156 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 OR7A17O14581 309 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 MSH4O15457 936 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 BCAS1O75363 584 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 SERF1AO75920 110 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 CA1P00915 261 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 KLK2P20151 261 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 HNRNPA2B1P22626 353 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 HMGB2P26583 209 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 ADORA2BP29275 332 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ADSSP30520 456 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 PRKAR2BP31323 418 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 RPL29P47914 159 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 EFNA3P52797 238 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 OTUD4Q01804 1114 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 OC90Q02509 493 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 PDK4Q16654 411 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 OR2B11Q5JQS5 317 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 PAGE2BQ5JRK9 111 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 WSCD1Q658N2 575 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 OR5M10Q6IEU7 315 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 GALNT17Q6IS24 598 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 FAM71F2Q6NXP2 309 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 FAM199XQ6PEV8 388 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 APTXQ7Z2E3 356 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 KIAA1328Q86T90 577 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ZNF584Q8IVC4 421 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 LRRC43Q8N309 656 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ZNF540Q8NDQ6 660 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 DENND6BQ8NEG7 585 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 OR2A12Q8NGT7 310 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 AENQ8WTP8 325 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 RPL3LQ92901 407 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 SLC25A38Q96DW6 304 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ZNF414Q96IQ9 312 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 CELF6Q96J87 481 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 C12orf66Q96MD2 445 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 Q9H3A6 140 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 GLIPR2Q9H4G4 154 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 RMND5AQ9H871 391 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 PALMDQ9NP74 551 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 PAK1IP1Q9NWT1 392 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 B3GNT2Q9NY97 397 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 GNG12Q9UBI6 72 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ZNF221Q9UK13 617 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 ANGPTL2Q9UKU9 493 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 BRD4O60885 1362 aaPredicted RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 ADAMTS7Q9UKP4 1686 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 COL14A1Q05707 1796 aaKnown RBP2.43□□□□□ -2.02
RFC4-211ENST00000460408 TRIOBPQ9H2D6 2365 aa2.43□□□□□ -2.02
RFC4-211ENST00000460408 FRMPD4Q14CM0 1322 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 TNS3Q68CZ2 1445 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 SSH2Q76I76 1423 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 KCPQ6ZWJ8 1503 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 CDC42BPAQ5VT25 1732 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 NRAPQ86VF7 1730 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 CCNB3Q8WWL7 1395 aa2.42□□□□□ -2.02
RFC4-211ENST00000460408 ZFP92A6NM28 416 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms