RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 OR12D2P58182 307 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 PFN3P60673 137 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SRP54P61011 504 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ISL1P61371 349 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 IFI35P80217 286 aaPredicted RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 IRF9Q00978 393 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 PPP1R8Q12972 351 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SCGB2A2Q13296 93 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MAB21L1Q13394 359 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 CYLC2Q14093 348 aaPredicted RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SCARB2Q14108 478 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 P2RY6Q15077 328 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 GPR68Q15743 365 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ASIC2Q16515 512 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DDR2Q16832 855 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ALFQ53S48 1182 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 CCDC178Q5BJE1 867 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ACSBG2Q5FVE4 666 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TNFAIP8L3Q5GJ75 292 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ZNF506Q5JVG8 444 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 CD276Q5ZPR3 534 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MFSD12Q6NUT3 480 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 C8orf82Q6P1X6 216 aaPredicted RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 PGM2L1Q6PCE3 622 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DARS2Q6PI48 645 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 KLHL24Q6TFL4 600 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 GK5Q6ZS86 529 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 Q6ZTI0 123 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TPGS1Q6ZTW0 290 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RALYLQ86SE5 291 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 HOGA1Q86XE5 327 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RNF130Q86XS8 419 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DCP2Q8IU60 420 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RHPN2Q8IUC4 686 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SYT12Q8IV01 421 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DENND6AQ8IWF6 608 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 IFNL2Q8IZJ0 200 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MFSD4AQ8N468 514 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TC2NQ8N9U0 490 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 BOLLQ8N9W6 283 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 OR4B1Q8NGF8 309 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 OR4A4PQ8NGN8 299 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 OR1P1Q8NH06 330 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 BBS10Q8TAM1 723 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TBC1D15Q8TC07 691 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 NT5CQ8TCD5 201 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SMCR5Q8TEV8 140 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 C16orf78Q8WTQ4 265 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ERCC4Q92889 916 aaPredicted RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MYDGFQ969H8 173 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RTP4Q96DX8 246 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 OTUB1Q96FW1 271 aaPredicted RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 VMP1Q96GC9 406 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 C16orf58Q96GQ5 468 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MS4A3Q96HJ5 214 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 REXO5Q96IC2 774 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 Q96M85 177 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 BBS4Q96RK4 519 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TGS1Q96RS0 853 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SRPK1Q96SB4 655 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MBOAT4Q96T53 435 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RIT2Q99578 217 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 C1orf50Q9BV19 199 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 LRRC61Q9BV99 259 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SLC13A1Q9BZW2 595 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 UCK2Q9BZX2 261 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 OR2J1Q9GZK6 312 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 NRSN2Q9GZP1 204 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 VPS16Q9H269 839 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MTIF3Q9H2K0 278 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 TFB2MQ9H5Q4 396 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 EFCC1Q9HA90 598 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SLC52A2Q9HAB3 445 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MEAF6Q9HAF1 191 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 POLD4Q9HCU8 107 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RIC8AQ9NPQ8 531 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MIEF1Q9NQG6 463 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SLC39A9Q9NUM3 307 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DNAJC11Q9NVH1 559 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 BABAM1Q9NWV8 329 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ABI3Q9P2A4 366 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 MSRAQ9UJ68 235 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DDX41Q9UJV9 622 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 FBXL21Q9UKT6 434 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ERVK-19Q9WJR5 959 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 APOBEC2Q9Y235 224 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 CNPY2Q9Y2B0 182 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 RABGAP1Q9Y3P9 1069 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 WDR45Q9Y484 360 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 NFE2L3Q9Y4A8 694 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SPEF1Q9Y4P9 236 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 SAMM50Q9Y512 469 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ADGRG1Q9Y653 693 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 ABCC6O95255 1503 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 UHRF1BP1LA0JNW5 1464 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 DDX60Q8IY21 1712 aaKnown RBP-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 KIAA1551Q9HCM1 1747 aa-2.34□□□□□ -2.78
SNORD54-201ENST00000459159 N4BP2Q86UW6 1770 aaPredicted RBP-2.35□□□□□ -2.79
SNORD54-201ENST00000459159 IGLV3-16A0A075B6K0 115 aa-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms