RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 NTN1O95631 604 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 HNRNPCL4P0DMR1 293 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 POU2F1P14859 743 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 HOXB9P17482 250 aaPredicted RBP16.71■□□□□ 0.27
USP39-209ENST00000458268 RPS4Y1P22090 263 aaKnown RBP16.71■□□□□ 0.27
USP39-209ENST00000458268 PPIBP23284 216 aaKnown RBP16.71■□□□□ 0.27
USP39-209ENST00000458268 AQP1P29972 269 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 GRINAQ7Z429 371 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 CMIPQ8IY22 773 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 C10orf111Q8N326 155 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 BBS10Q8TAM1 723 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 GMPPAQ96IJ6 420 aaPredicted RBP16.71■□□□□ 0.27
USP39-209ENST00000458268 KLHL4Q9C0H6 718 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 OR11A1Q9GZK7 315 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 IKZF5Q9H5V7 419 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 ZNF385DQ9H6B1 395 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 A4GALTQ9NPC4 353 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 EXOSC3Q9NQT5 275 aaKnown RBP16.71■□□□□ 0.27
USP39-209ENST00000458268 CHRNA9Q9UGM1 479 aa16.71■□□□□ 0.27
USP39-209ENST00000458268 SULT2B1O00204 365 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 PABPC4LP0CB38 370 aaKnown RBP16.7■□□□□ 0.26
USP39-209ENST00000458268 KLK2P20151 261 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 ENPP1P22413 925 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 APOBEC1P41238 236 aaKnown RBP16.7■□□□□ 0.26
USP39-209ENST00000458268 MTPNP58546 118 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 FAM27E3Q08E93 113 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 CAPRIN1Q14444 709 aaKnown RBP16.7■□□□□ 0.26
USP39-209ENST00000458268 POU4F3Q15319 338 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 CYP51A1Q16850 503 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 SYT14P1Q58G82 188 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 TMEM201Q5SNT2 666 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 CLIP4Q8N3C7 705 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 ZNF775Q96BV0 537 aaPredicted RBP16.7■□□□□ 0.26
USP39-209ENST00000458268 ZC3HAV1LQ96H79 300 aaKnown RBP16.7■□□□□ 0.26
USP39-209ENST00000458268 DSPPQ9NZW4 1301 aa16.7■□□□□ 0.26
USP39-209ENST00000458268 ADGRG4Q8IZF6 3080 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TEX15Q9BXT5 2789 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TMED7-TICAM2A0A0A6YYA0 188 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 FESP07332 822 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 ARAFP10398 606 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TACR3P29371 465 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 PEX19P40855 299 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
USP39-209ENST00000458268 DIO1P49895 249 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 OR2B6P58173 313 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 COPZ1P61923 177 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 CDK6Q00534 326 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 EPS8Q12929 822 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 SCARB2Q14108 478 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 SELPLGQ14242 412 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 ANKRD34AQ69YU3 496 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 GTF2IRD2BQ6EKJ0 949 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 ZNF474Q6S9Z5 364 aaPredicted RBP16.69■□□□□ 0.26
USP39-209ENST00000458268 GTF2IRD2Q86UP8 949 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 RETREG3Q86VR2 466 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TUSC5Q8IXB3 177 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 OR6K3Q8NGY3 331 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 RNF128Q8TEB7 428 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 SLC25A43Q8WUT9 341 aaPredicted RBP16.69■□□□□ 0.26
USP39-209ENST00000458268 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 CPPED1Q9BRF8 314 aaPredicted RBP16.69■□□□□ 0.26
USP39-209ENST00000458268 SLC39A3Q9BRY0 314 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 CCDC106Q9BWC9 280 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 POLDIP3Q9BY77 421 aaKnown RBP16.69■□□□□ 0.26
USP39-209ENST00000458268 ARMC7Q9H6L4 198 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TMEM45AQ9NWC5 275 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 CORO2BQ9UQ03 480 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 TMED7Q9Y3B3 224 aa16.69■□□□□ 0.26
USP39-209ENST00000458268 SH3D21A4FU49 640 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 CDHR4A6H8M9 788 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 DNAJA2O60884 412 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 SS18L1O75177 396 aaPredicted RBP16.68■□□□□ 0.26
USP39-209ENST00000458268 PGM3O95394 542 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 PRG2P13727 222 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 AGTR1P30556 359 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 CD79BP40259 229 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 POLR2HP52434 150 aaKnown RBP16.68■□□□□ 0.26
USP39-209ENST00000458268 HOXC5Q00444 222 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 SORDQ00796 357 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 METTL21CQ5VZV1 264 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.68■□□□□ 0.26
USP39-209ENST00000458268 ZNF550Q7Z398 422 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 SERPINA11Q86U17 422 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 ZNF440Q8IYI8 595 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 FAM222BQ8WU58 562 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 NRGNQ92686 78 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 PMM1Q92871 262 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 ARL5BQ96KC2 179 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 CGREF1Q99674 301 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 SPATA9Q9BWV2 254 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 PIF1Q9H611 641 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 IFT52Q9Y366 437 aa16.68■□□□□ 0.26
USP39-209ENST00000458268 ANKHD1Q8IWZ3 2542 aaKnown RBP16.67■□□□□ 0.26
USP39-209ENST00000458268 TRBV5-3A0A0A0MS03 114 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 TMEM72A0PK05 275 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms