RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZFYVE21Q9BQ24 234 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 BCL2L10Q9HD36 194 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 MGAT4AQ9UM21 535 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 DAPP1Q9UN19 280 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 PCDHGB7Q9Y5F8 929 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 TRAV27A0A087WT01 109 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 EMC8O43402 210 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 HRGP04196 525 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 ANKRD34CP0C6C1 535 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 PTHLHP12272 177 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 IL9P15248 144 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 DRD5P21918 477 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 THBS2P35442 1172 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 POU6F2P78424 691 aaPredicted RBP11.47□□□□□ -0.57
LINC00959-201ENST00000456581 PRR5P85299 388 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 ST3GAL3Q11203 375 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 UBXN2BQ14CS0 331 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 SF3A2Q15428 464 aaKnown RBP11.47□□□□□ -0.57
LINC00959-201ENST00000456581 BHLHB9Q6PI77 547 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 MRGPREQ86SM8 312 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 TSTD1Q8NFU3 115 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 DACT3Q96B18 629 aaPredicted RBP11.47□□□□□ -0.57
LINC00959-201ENST00000456581 COQ7Q99807 217 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 LRRC61Q9BV99 259 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 GON7Q9BXV9 100 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 UBE2ZQ9H832 354 aaPredicted RBP11.47□□□□□ -0.57
LINC00959-201ENST00000456581 NLGN3Q9NZ94 848 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 THADAQ6YHU6 1953 aa11.47□□□□□ -0.57
LINC00959-201ENST00000456581 A0A0G2JPF8 293 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 A0A1W2PRG6 482 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 HNRNPCL2B2RXH8 293 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 C10orf142B7Z368 130 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 SGK494L7N484 410 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 PEX12O00623 359 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 CASC3O15234 703 aaKnown RBP11.46□□□□□ -0.57
LINC00959-201ENST00000456581 TNFSF14O43557 240 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 ADRB1P08588 477 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 SMIM10L1P0DMW3 83 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 OR12D2P58182 307 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 SHC2P98077 582 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 TNFRSF17Q02223 184 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 MRPL28Q13084 256 aaKnown RBP11.46□□□□□ -0.57
LINC00959-201ENST00000456581 ZC3H14Q6PJT7 736 aaKnown RBP11.46□□□□□ -0.57
LINC00959-201ENST00000456581 ZNF655Q8N720 491 aaPredicted RBP11.46□□□□□ -0.57
LINC00959-201ENST00000456581 AVL9Q8NBF6 648 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 GALNT6Q8NCL4 622 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 OR56A1Q8NGH5 318 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 OR51A7Q8NH64 312 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 TRIM63Q969Q1 353 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 SMIM10Q96HG1 83 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 ARHGDIGQ99819 225 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 GSDMCQ9BYG8 508 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 OR52D1Q9H346 318 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 IL20Q9NYY1 176 aa11.46□□□□□ -0.57
LINC00959-201ENST00000456581 H2AFY2Q9P0M6 372 aaPredicted RBP11.46□□□□□ -0.57
LINC00959-201ENST00000456581 A0A1W2PPC4 97 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 SLC9B1P1A6NJY1 282 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 SNTNA6NMZ2 147 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 J3QLW9 94 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ARHGEF9O43307 516 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 FGF17O60258 216 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 NOS1APO75052 506 aaPredicted RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF19P17023 458 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 HTR2AP28223 471 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 HTR1FP30939 366 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 DGCR2P98153 550 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 MAB21L1Q13394 359 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 LYPD4Q6UWN0 246 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 TMEM64Q6YI46 380 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF836Q6ZNA1 936 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 FRRS1Q6ZNA5 592 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 PRR23CQ6ZRP0 262 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 CEACAM19Q7Z692 300 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 OR2T33Q8NG76 320 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 OR13C2Q8NGS9 318 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 BAHD1Q8TBE0 780 aaPredicted RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 NT5CQ8TCD5 201 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZDHHC1Q8WTX9 485 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ACOT11Q8WXI4 607 aaPredicted RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 KLHDC7BQ96G42 594 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZC3HAV1LQ96H79 300 aaKnown RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 PEX11GQ96HA9 241 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 DPCDQ9BVM2 203 aaPredicted RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 SPATA5L1Q9BVQ7 753 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 PHF7Q9BWX1 381 aaPredicted RBP11.46□□□□□ -0.58
LINC00959-201ENST00000456581 NKIRAS2Q9NYR9 191 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.58
LINC00959-201ENST00000456581 GNB5O14775 395 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 B3GALT2O43825 422 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SDC3O75056 442 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 SLC43A1O75387 559 aa11.45□□□□□ -0.58
LINC00959-201ENST00000456581 CDC123O75794 336 aaPredicted RBP11.45□□□□□ -0.58
LINC00959-201ENST00000456581 MPC2O95563 127 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms