RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 FCRL1Q96LA6 429 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 OR7D2Q96RA2 312 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 ZNF300Q96RE9 604 aaPredicted RBP6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 TNFRSF13CQ96RJ3 184 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 SDF2Q99470 211 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 KCNS3Q9BQ31 491 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 C1orf50Q9BV19 199 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 BHLHE41Q9C0J9 482 aaPredicted RBP6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 NMUR2Q9GZQ4 415 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 SHARPINQ9H0F6 387 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 QRSL1Q9H0R6 528 aaKnown RBP6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 C12orf65Q9H3J6 166 aaKnown RBP6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 TUBB1Q9H4B7 451 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 COQ10BQ9H8M1 238 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 ANKZF1Q9H8Y5 726 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 GPATCH2Q9NW75 528 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 PARPBPQ9NWS1 579 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 TAS2R16Q9NYV7 291 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 LPAR3Q9UBY5 353 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 ATP23Q9Y6H3 246 aa6.92□□□□□ -1.3
AC007879.2-201ENST00000454444 RTTNQ86VV8 2226 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 IGHV4-30-2A0A087WSY4 118 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 A0A1W2PR80 420 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 TMEM233B4DJY2 109 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SHISA9B4DS77 424 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SMAD9O15198 467 aaKnown RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 PHF1O43189 567 aaPredicted RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 GPRIN2O60269 458 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 KRT33AO76009 404 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CD8AP01732 235 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SHBGP04278 402 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CHRNGP07510 517 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 UQCRBP14927 111 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CCNA2P20248 432 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 HNF1AP20823 631 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CD40P25942 277 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SERPINB5P36952 375 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CASP9P55211 416 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 OR2B6P58173 313 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 IFFO1Q0D2I5 559 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 PDK3Q15120 406 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 TMEM249Q2WGJ8 235 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SLC25A53Q5H9E4 307 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 ZNF544Q6NX49 715 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 C6orf120Q7Z4R8 191 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 KRTCAP2Q8N6L1 136 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 ZNF433Q8N7K0 673 aaPredicted RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 OR5D16Q8NGK9 328 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 OR4A15Q8NGL6 344 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 PSMA8Q8TAA3 256 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 XAGE5Q8WWM1 108 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 NANOS1Q8WY41 292 aaKnown RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SLC35G5Q96KT7 338 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 KLHDC3Q9BQ90 382 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 NAA11Q9BSU3 229 aaPredicted RBP6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 INPP5KQ9BT40 448 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 C1QTNF6Q9BXI9 259 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 ACER3Q9NUN7 267 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 CHRNA9Q9UGM1 479 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 MKLN1Q9UL63 735 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 SLC35A3Q9Y2D2 325 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 HDGFL3Q9Y3E1 203 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 KCNE3Q9Y6H6 103 aa6.91□□□□□ -1.3
AC007879.2-201ENST00000454444 VPS13CQ709C8 3753 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 RNF103-CHMP3A0A140T963 221 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 VSTM5A8MXK1 200 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 E7EQL1 145 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 FCMRO60667 390 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 EIF1BO60739 113 aaKnown RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 SKAP2O75563 359 aaPredicted RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 PGM3O95394 542 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 H6PDO95479 791 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 WNT11O96014 354 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 COX5AP20674 150 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 ALDH3A1P30838 453 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 CHI3L1P36222 383 aaPredicted RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 HTR3AP46098 478 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 CLK1P49759 484 aaKnown RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 EFNA4P52798 201 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 PRPS1P60891 318 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 HBA1P69905 142 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 SLC35A1P78382 337 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 IRX1P78414 480 aaPredicted RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 LOXL1Q08397 574 aaPredicted RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 SKP2Q13309 424 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 GNA13Q14344 377 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 PCLAFQ15004 111 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 ZNF141Q15928 474 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 CARTPTQ16568 116 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 ARHGAP11BQ3KRB8 267 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 IQCCQ4KMZ1 466 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 GPAT3Q53EU6 434 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 EXOSC6Q5RKV6 272 aaKnown RBP6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 C6orf136Q5SQH8 315 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 C6orf52Q5T4I8 152 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 C9orf135Q5VTT2 229 aa6.9□□□□□ -1.3
AC007879.2-201ENST00000454444 CASP12Q6UXS9 341 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms