RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 KLHL36Q8N4N3 616 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 FAM98AQ8NCA5 519 aaKnown RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 SDR9C7Q8NEX9 313 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 NLGN4YQ8NFZ3 816 aaPredicted RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 OR52E2Q8NGJ4 325 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 HTRA1Q92743 480 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 MESP1Q9BRJ9 268 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 ARHGAP9Q9BRR9 750 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 MRPS18AQ9NVS2 196 aaKnown RBP10.82□□□□□ -0.68
VTA1-203ENST00000452973 CTSFQ9UBX1 484 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 PEX16Q9Y5Y5 336 aa10.82□□□□□ -0.68
VTA1-203ENST00000452973 DAPL1A0PJW8 107 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 BLACEA4D250 179 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 ZNF670-ZNF695F2Z2N8 137 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 NPIPB9F8W1W9 429 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 SCDO00767 359 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 SLC30A4O14863 429 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 KHNYNO15037 678 aaKnown RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 POLR1CO15160 346 aaPredicted RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 SOX30O94993 753 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 RORCP51449 518 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 NR0B1P51843 470 aaKnown RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 FABP5Q01469 135 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 HNRNPA0Q13151 305 aaKnown RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 LANCL3Q6ZV70 420 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 TMPRSS9Q7Z410 1059 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 GRAMD2AQ8IUY3 354 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 CLDN22Q8N7P3 220 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 OR5M3Q8NGP4 307 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 CLDN23Q96B33 292 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 DCLRE1CQ96SD1 692 aaKnown RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 KLHDC3Q9BQ90 382 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 FN3KQ9H479 309 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 MKKSQ9NPJ1 570 aaPredicted RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 WDFY3Q8IZQ1 3526 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 CD8B2A6NJW9 211 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 BLOC1S5-TXNDC5H3BN57 136 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 NUDT14O95848 222 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 CD8BP10966 210 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 RORAP35398 523 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 HCCSP53701 268 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 RNLSQ5VYX0 342 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 RTL4Q6ZR62 310 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 LINC00299Q6ZSB3 139 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 LSMEM1Q8N8F7 131 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 OR2I1PQ8NGU4 316 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 DEPDC7Q96QD5 511 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 RAB33BQ9H082 229 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 DUSP15Q9H1R2 295 aaPredicted RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 MCCC2Q9HCC0 563 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 KLHL1Q9NR64 748 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 CMC2Q9NRP2 79 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 C14orf119Q9NWQ9 140 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 IER3IP1Q9Y5U9 82 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 MPDZO75970 2070 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 C2orf92A0A1B0GVN3 265 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 LINC00854A0A1B0GVQ3 168 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 MCIDASD6RGH6 385 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 H3BMH7 237 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 AZGP1P25311 298 aaKnown RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 CTBP2P56545 445 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 LYSMD4Q5XG99 296 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 HLA-DQA1Q5Y7H0 255 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 GUSBP11Q6P575 273 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 GID4Q8IVV7 300 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 ACBD7Q8N6N7 88 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 POC5Q8NA72 575 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 THAP3Q8WTV1 239 aaPredicted RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 KCTD7Q96MP8 289 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 ZNF578Q96N58 590 aaPredicted RBP10.81□□□□□ -0.68
VTA1-203ENST00000452973 TEAD3Q99594 435 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 NUDT9Q9BW91 350 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 UBQLN4Q9NRR5 601 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 EML5Q05BV3 1969 aa10.81□□□□□ -0.68
VTA1-203ENST00000452973 FUOMA2VDF0 154 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ELOA3DA6NLF2 546 aaPredicted RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 IMPA2O14732 288 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 MAGEB4O15481 346 aaPredicted RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 CBFA2T3O75081 653 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 PTP4A3O75365 173 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 UTS2O95399 124 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 IFI6P09912 130 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ZNF3P17036 446 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ITPKBP27987 946 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 TNFSF8P32971 234 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 PSMD4P55036 377 aaKnown RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 SHBQ15464 509 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 TMEM44Q2T9K0 475 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ELOA3BQ3SY89 546 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 PLK5Q496M5 336 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ZNF362Q5T0B9 420 aaPredicted RBP10.8□□□□□ -0.68
VTA1-203ENST00000452973 STEAP3Q658P3 488 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 LAX1Q8IWV1 398 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 D2HGDHQ8N465 521 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ZSCAN1Q8NBB4 408 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ELOA3Q8NG57 546 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 PIGKQ92643 395 aa10.8□□□□□ -0.68
VTA1-203ENST00000452973 SGTBQ96EQ0 304 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms