RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 BEX2Q9BXY8 128 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPN2Q9H9Y4 310 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 POPDC2Q9HBU9 364 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 THSD1Q9NS62 852 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPATCH2LQ9NWQ4 482 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TAS2R7Q9NYW3 318 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLRF1Q9NZS2 232 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 BFARQ9NZS9 450 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 FLRT3Q9NZU0 649 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ANAPC7Q9UJX3 599 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAF1Q9UNN5 650 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 LAMP3Q9UQV4 416 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 HYOU1Q9Y4L1 999 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TBL2Q9Y4P3 447 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ALG6Q9Y672 507 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CDH10Q9Y6N8 788 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 V9GYY9 64 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAD50Q92878 1312 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 AQRO60306 1485 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1B0GTI1 187 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1W2PP11 408 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1W2PPV9 198 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC22A23A1A5C7 686 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SAGE2PA6NJ88 616 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 MARCH11A6NNE9 402 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 G3V4G9 280 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SIRPB1O00241 398 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 GOSR2O14653 212 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 IMPA2O14732 288 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 TAPBPO15533 448 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRKAB2O43741 272 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SYNGR3O43761 229 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CHST1O43916 411 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 RNASEH1O60930 286 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM20BO75063 409 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATP5LO75964 103 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 LYPLA2O95372 231 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 HLA-HP01893 362 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 MMP1P03956 469 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPS17P08708 135 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 KRT16P08779 473 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CHRM5P08912 532 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 H2BFMP0C1H6 154 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 OCM2P0CE71 109 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CALM1P0DP23 149 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CALM2P0DP24 149 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CALM3P0DP25 149 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CD59P13987 128 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF43P17038 809 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 AOC1P19801 751 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CA4P22748 312 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 HOXA7P31268 230 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAS1LP35410 378 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CSKP41240 450 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 RBM34P42696 430 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 BRCC3P46736 316 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PLK1P53350 603 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PKNOX1P55347 436 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CXCR4P61073 352 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ISL1P61371 349 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 NHLH1Q02575 133 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLRB1Q12918 225 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 MED21Q13503 144 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR4D1Q15615 310 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 HLA-BQ31612 363 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 NDUFAF6Q330K2 333 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 COX19Q49B96 90 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 Q4G0T1 1027 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 TP53I3Q53FA7 332 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CEP85LQ5SZL2 805 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 FNDC7Q5VTL7 733 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ARMCX5Q6P1M9 558 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PAQR6Q6TCH4 344 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 DHRS11Q6UWP2 260 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRSS57Q6UWY2 283 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 GDPD4Q6W3E5 623 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ABHD13Q7L211 337 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC29A4Q7RTT9 530 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 C5orf24Q7Z6I8 188 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 LINC00518Q8N0U6 118 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CYP4Z2PQ8N1L4 340 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ELMOD1Q8N336 334 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 METTL4Q8N3J2 472 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 GBGT1Q8N5D6 347 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CDRT4Q8N9R6 151 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 LMNTD1Q8N9Z9 388 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR2AP1Q8NGE2 309 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PCED1BQ96HM7 432 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 RNF145Q96MT1 663 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 ERGIC2Q96RQ1 377 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC6A7Q99884 636 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 MACROD1Q9BQ69 325 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 UTP23Q9BRU9 249 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPP25Q9BUL9 199 aaKnown RBP3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 UCK2Q9BZX2 261 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC25A51Q9H1U9 297 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 PPA2Q9H2U2 334 aa3.93□□□□□ -1.78
HMGB3P21-201ENST00000452483 CPVLQ9H3G5 476 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms