RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KRT73Q86Y46 540 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 CLIP4Q8N3C7 705 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 RCN3Q96D15 328 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 ZFP3Q96NJ6 502 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 SPATA5L1Q9BVQ7 753 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 PINK1Q9BXM7 581 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 PAQR5Q9NXK6 330 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF629Q9UEG4 869 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF175Q9Y473 711 aa17.92■□□□□ 0.46
COL9A3-202ENST00000452372 A0A0J9YW62 118 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 SLC22A20A6NK97 555 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 GJE1A6NN92 205 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 AP3D1O14617 1153 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 TGM6O95932 706 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 UQCRBP14927 111 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 APOBEC1P41238 236 aaKnown RBP17.91■□□□□ 0.46
COL9A3-202ENST00000452372 IDH2P48735 452 aaKnown RBP17.91■□□□□ 0.46
COL9A3-202ENST00000452372 MERTKQ12866 999 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 EPS8Q12929 822 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 SGCBQ16585 318 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 RABL3Q5HYI8 236 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 GRINAQ7Z429 371 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 LIX1LQ8IVB5 337 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ZZZ3Q8IYH5 903 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 OR10D3Q8NH80 312 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 OR2V1Q8NHB1 315 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 SLC35B4Q969S0 331 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF845Q96IR2 970 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-202ENST00000452372 KLHL15Q96M94 604 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 CCT8L2Q96SF2 557 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF607Q96SK3 696 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ECSITQ9BQ95 431 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 RSPO3Q9BXY4 272 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-202ENST00000452372 UCK2Q9BZX2 261 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 KCNJ16Q9NPI9 418 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ANGPT4Q9Y264 503 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ARL2BPQ9Y2Y0 163 aa17.91■□□□□ 0.46
COL9A3-202ENST00000452372 ANKRD17O75179 2603 aaKnown RBP17.9■□□□□ 0.46
COL9A3-202ENST00000452372 SERPINB7O75635 380 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 GKN3PP0CG01 181 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 CTSSP25774 331 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 SHC1P29353 583 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 PRKAR1BP31321 381 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 SFTPDP35247 375 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 ACAA2P42765 397 aaKnown RBP17.9■□□□□ 0.46
COL9A3-202ENST00000452372 EIF1AXP47813 144 aaKnown RBP17.9■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF136P52737 540 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 PCBP3P57721 371 aaKnown RBP17.9■□□□□ 0.46
COL9A3-202ENST00000452372 TMEM176BQ3YBM2 270 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-202ENST00000452372 PDSS1Q5T2R2 415 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 POMZP3Q6PJE2 187 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 ZNF550Q7Z398 422 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 CALHM3Q86XJ0 350 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 SLC30A8Q8IWU4 369 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 FIG4Q92562 907 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 CMTM5Q96DZ9 223 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 EFCAB1Q9HAE3 211 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 SERINC1Q9NRX5 453 aa17.9■□□□□ 0.46
COL9A3-202ENST00000452372 DVL2O14641 736 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 TNFSF11O14788 317 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 AIM2O14862 343 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 CXCL13O43927 109 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 IL18BPO95998 194 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 TMIGD3P0DMS9 266 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-202ENST00000452372 IGFBP2P18065 325 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 AQP1P29972 269 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 PRDX6P30041 224 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 SLC1A3P43003 542 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 HTR3AP46098 478 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 PON3Q15166 354 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 SLC25A35Q3KQZ1 300 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 HBMQ6B0K9 141 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 OR2A2Q6IF42 318 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 C3orf33Q6P1S2 294 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 DHRS4L2Q6PKH6 230 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 P4HA3Q7Z4N8 544 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 ATP6V1C2Q8NEY4 427 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 BHLHE22Q8NFJ8 381 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-202ENST00000452372 FNDC9Q8TBE3 224 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 GPATCH1Q9BRR8 931 aaKnown RBP17.89■□□□□ 0.45
COL9A3-202ENST00000452372 CTPS2Q9NRF8 586 aa17.89■□□□□ 0.45
COL9A3-202ENST00000452372 NKX2-6A6NCS4 301 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 PRORSD1PA6NEY8 169 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 FAM90A27PA6NNH2 459 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 GCM2O75603 506 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-202ENST00000452372 FKBP2P26885 142 aaKnown RBP17.88■□□□□ 0.45
COL9A3-202ENST00000452372 SSTR2P30874 369 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 PCGF2P35227 344 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 OPRM1P35372 400 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 CARD18P57730 90 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 TFF3Q07654 80 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 FOXF2Q12947 444 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 VMACQ2NL98 169 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 ADGRG3Q86Y34 549 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 ARMC8Q8IUR7 673 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 ANKS4BQ8N8V4 417 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 OSTF1Q92882 214 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 INTS12Q96CB8 462 aaKnown RBP17.88■□□□□ 0.45
COL9A3-202ENST00000452372 C14orf79Q96F83 325 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 ZNF583Q96ND8 569 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms