RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ENPP4Q9Y6X5 453 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 V9GYQ6 96 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 PRRC2CQ9Y520 2896 aaKnown RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 A0A1B0GWA3 101 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 OR2M5A3KFT3 312 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 OR14I1A6ND48 311 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 AQP7O14520 342 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 OR5F1O95221 314 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 FABP3P05413 133 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 RAP2AP10114 183 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 THRBP10828 461 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 RHCEP18577 417 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 GCKP35557 465 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 POLR2HP52434 150 aaKnown RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 VLDLRP98155 873 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 CCNIQ14094 377 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 PRR30Q53SZ7 412 aaPredicted RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 COLEC12Q5KU26 742 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 RAET1LQ5VY80 246 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 ARHGAP11AQ6P4F7 1023 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 DEF8Q6ZN54 512 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 GHDCQ8N2G8 530 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 CADM2Q8N3J6 435 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 CPT1CQ8TCG5 803 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 CANT1Q8WVQ1 401 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 SLC38A4Q969I6 547 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 PRRC1Q96M27 445 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 SFXN2Q96NB2 322 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF300Q96RE9 604 aaPredicted RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 SEPHS2Q99611 448 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 SLC6A15Q9H2J7 730 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 LDAHQ9H6V9 325 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 CCM2LQ9NUG4 571 aaPredicted RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 NDUFAF4Q9P032 175 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 RPS6KB2Q9UBS0 482 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 OSGIN1Q9UJX0 560 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 RPH3AQ9Y2J0 694 aaPredicted RBP10.47□□□□□ -0.73
SCN9A-204ENST00000452182 LIPGQ9Y5X9 500 aa10.47□□□□□ -0.73
SCN9A-204ENST00000452182 TRAPPC13A5PLN9 417 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 CPSF4LA6NMK7 179 aaKnown RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF208O43345 1280 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 WISP2O76076 250 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 PRSS23O95084 383 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 PNMTP11086 282 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 EDN3P14138 238 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 TACR3P29371 465 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 IFNA8P32881 189 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 RAC1P63000 192 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 MERTKQ12866 999 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 SELENBP1Q13228 472 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 BCL2A1Q16548 175 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.46□□□□□ -0.743e-7■■■■□ 21
SCN9A-204ENST00000452182 SOWAHCQ53LP3 525 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ALG10BQ5I7T1 473 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 VASNQ6EMK4 673 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ATG4DQ86TL0 474 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 TSPYL5Q86VY4 417 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 CYP4Z1Q86W10 505 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ADGRG3Q86Y34 549 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 C10orf67Q8IYJ2 551 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 PAPD5Q8NDF8 572 aaKnown RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 SLC25A43Q8WUT9 341 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 MPP4Q96JB8 637 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF347Q96SE7 839 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 NPAS1Q99742 590 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 TSPAN10Q9H1Z9 355 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 DENND2DQ9H6A0 471 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 SERINC1Q9NRX5 453 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 STOML1Q9UBI4 398 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 A4GNTQ9UNA3 340 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF337Q9Y3M9 751 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 FAM32AQ9Y421 112 aaKnown RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 AP4B1Q9Y6B7 739 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 SMG1Q96Q15 3661 aaKnown RBP10.46□□□□□ -0.74
SCN9A-204ENST00000452182 COL6A6A6NMZ7 2263 aa10.46□□□□□ -0.74
SCN9A-204ENST00000452182 A0A087WUJ7 227 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 TMED7-TICAM2A0A0A6YYA0 188 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SHISA8B8ZZ34 492 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 FFAR1O14842 300 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CHP2O43745 196 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 EFNA2O43921 213 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 WISP1O95388 367 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 BMP7P18075 431 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SLC7A1P30825 629 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CLK1P49759 484 aaKnown RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 MLLT10P55197 1068 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CDH12P55289 794 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 TAS2R41P59536 307 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ST3GAL3Q11203 375 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 PIN1Q13526 163 aaPredicted RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 KPNB1Q14974 876 aaKnown RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 C3orf33Q6P1S2 294 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 LINC00114Q6XXX2 140 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF605Q86T29 641 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ZDHHC21Q8IVQ6 265 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CHERPQ8IWX8 916 aaKnown RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 OFCC1Q8IZS5 231 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ABTB1Q969K4 478 aaPredicted RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SARAFQ96BY9 339 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SLC41A3Q96GZ6 507 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms