RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ARRDC1Q8N5I2 433 aa8□□□□□ -1.13
LSM5-208ENST00000450169 DNAAF1Q8NEP3 725 aa8□□□□□ -1.13
LSM5-208ENST00000450169 OR5D16Q8NGK9 328 aa8□□□□□ -1.13
LSM5-208ENST00000450169 TNFAIP8L1Q8WVP5 186 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PMM1Q92871 262 aa8□□□□□ -1.13
LSM5-208ENST00000450169 FCRL4Q96PJ5 515 aa8□□□□□ -1.13
LSM5-208ENST00000450169 MGME1Q9BQP7 344 aa8□□□□□ -1.13
LSM5-208ENST00000450169 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 AP5M1Q9H0R1 490 aa8□□□□□ -1.13
LSM5-208ENST00000450169 TREM1Q9NP99 234 aa8□□□□□ -1.13
LSM5-208ENST00000450169 TRIM36Q9NQ86 728 aa8□□□□□ -1.13
LSM5-208ENST00000450169 KLK11Q9UBX7 282 aa8□□□□□ -1.13
LSM5-208ENST00000450169 AFF4Q9UHB7 1163 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 GNG14A0A1W2PPG7 69 aa8□□□□□ -1.13
LSM5-208ENST00000450169 A0A1W2PRQ8 180 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ANKRD20A5PA0PJZ0 165 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PYCARD-AS1I3L0S3 204 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PPIHO43447 177 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 DDNO94850 711 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 EPXP11678 715 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ACP5P13686 325 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PRG2P13727 222 aa8□□□□□ -1.13
LSM5-208ENST00000450169 RCC1P18754 421 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 GSTM3P21266 225 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ITGA3P26006 1051 aa8□□□□□ -1.13
LSM5-208ENST00000450169 AOAHP28039 575 aa8□□□□□ -1.13
LSM5-208ENST00000450169 OR1E1P30953 314 aa8□□□□□ -1.13
LSM5-208ENST00000450169 SOAT1P35610 550 aa8□□□□□ -1.13
LSM5-208ENST00000450169 RGRP47804 291 aa8□□□□□ -1.13
LSM5-208ENST00000450169 RBP2P50120 134 aa8□□□□□ -1.13
LSM5-208ENST00000450169 RAE1P78406 368 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 CHIT1Q13231 466 aa8□□□□□ -1.13
LSM5-208ENST00000450169 NFATC2Q13469 925 aa8□□□□□ -1.13
LSM5-208ENST00000450169 UBE2NLQ5JXB2 153 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ENTPD8Q5MY95 495 aa8□□□□□ -1.13
LSM5-208ENST00000450169 AADACL4Q5VUY2 407 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ZDHHC20Q5W0Z9 365 aa8□□□□□ -1.13
LSM5-208ENST00000450169 LIN54Q6MZP7 749 aa8□□□□□ -1.13
LSM5-208ENST00000450169 KRT77Q7Z794 578 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PXKQ7Z7A4 578 aa8□□□□□ -1.13
LSM5-208ENST00000450169 NUDT13Q86X67 352 aa8□□□□□ -1.13
LSM5-208ENST00000450169 KCNRGQ8N5I3 272 aa8□□□□□ -1.13
LSM5-208ENST00000450169 EID2Q8N6I1 236 aa8□□□□□ -1.13
LSM5-208ENST00000450169 OR1J4Q8NGS1 313 aa8□□□□□ -1.13
LSM5-208ENST00000450169 OR5J2Q8NH18 312 aa8□□□□□ -1.13
LSM5-208ENST00000450169 OR5W2Q8NH69 310 aa8□□□□□ -1.13
LSM5-208ENST00000450169 BRIX1Q8TDN6 353 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 FCAMRQ8WWV6 532 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ASB13Q8WXK3 278 aa8□□□□□ -1.13
LSM5-208ENST00000450169 IGSF8Q969P0 613 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ARL11Q969Q4 196 aa8□□□□□ -1.13
LSM5-208ENST00000450169 HIST1H2BAQ96A08 127 aa8□□□□□ -1.13
LSM5-208ENST00000450169 NEU1Q99519 415 aa8□□□□□ -1.13
LSM5-208ENST00000450169 NAA11Q9BSU3 229 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 JAM3Q9BX67 310 aa8□□□□□ -1.13
LSM5-208ENST00000450169 TOLLIPQ9H0E2 274 aa8□□□□□ -1.13
LSM5-208ENST00000450169 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
LSM5-208ENST00000450169 SPG21Q9NZD8 308 aa8□□□□□ -1.13
LSM5-208ENST00000450169 CCDC88CQ9P219 2028 aa8□□□□□ -1.13
LSM5-208ENST00000450169 KIAA1671Q9BY89 1806 aa8□□□□□ -1.13
LSM5-208ENST00000450169 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TRAV14DV4A0A0A6YYC5 116 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TMEM272A0A1B0GTI8 110 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF705EA8MWA4 302 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 PEX10O60683 326 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SH3BGRLO75368 114 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PCDH8O95206 1070 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 FARS2O95363 451 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 PF4P02776 101 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 BCHEP06276 602 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ASGR2P07307 311 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ANXA2P07355 339 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 COX5BP10606 129 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TBXA2RP21731 343 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SDHAP31040 664 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 MAT2AP31153 395 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 CTNNB1P35222 781 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CSNK1EP49674 416 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 RAB4BP61018 213 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 AP1S1P61966 158 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PTSQ03393 145 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ILF3Q12906 894 aaKnown RBP eCLIP7.99□□□□□ -1.13
LSM5-208ENST00000450169 SKP2Q13309 424 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 DOC2AQ14183 400 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ERV3-1Q14264 604 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 RBM39Q14498 530 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF345Q14585 488 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TRAM1Q15629 374 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CSRP2Q16527 193 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PLEKHN1Q494U1 663 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 CLEC12AQ5QGZ9 265 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 OR52W1Q6IF63 320 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 C1orf94Q6P1W5 598 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 Q6ZVU0 165 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SLC36A1Q7Z2H8 476 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SERPINA9Q86WD7 417 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CMTM4Q8IZR5 234 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TMEM86AQ8N2M4 240 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 MUC20Q8N307 709 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 SIRT6Q8N6T7 355 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms