RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TIGARQ9NQ88 270 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CTPS2Q9NRF8 586 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 RLIMQ9NVW2 624 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CCDC167Q9P0B6 97 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 TESMINQ9Y4I5 508 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 A0A0G2JPF8 293 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 A0A1W2PP18 115 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 A0A1W2PPR1 153 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 SH3D21A4FU49 640 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 CDHR4A6H8M9 788 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 HNRNPCL3B7ZW38 293 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 HNRNPCL1O60812 293 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 ANP32DO95626 131 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 HRGP04196 525 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 PABPC4LP0CB38 370 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 HNRNPCL4P0DMR1 293 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 IDH2P48735 452 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 STX1BP61266 288 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 AGKQ53H12 422 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 MRPL2Q5T653 305 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 GTF2IRD2BQ6EKJ0 949 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 NUFIP2Q7Z417 695 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 GRINAQ7Z429 371 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 GTF2IRD2Q86UP8 949 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 CLIP4Q8N3C7 705 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 ARFGAP2Q8N6H7 521 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 ABHD3Q8WU67 409 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 TMEM19Q96HH6 336 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC39A3Q9BRY0 314 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 POLDIP3Q9BY77 421 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 A4GALTQ9NPC4 353 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 VAPAQ9P0L0 249 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
RTFDC1-204ENST00000449062 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SIAH2O43255 324 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 PRKD3O94806 890 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 GOSR1O95249 250 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 YES1P07947 543 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 IL7RP16871 459 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 GPX2P18283 190 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 AGTR1P30556 359 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 DNAJA1P31689 397 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC1A3P43003 542 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 HPCAP84074 193 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 EPS8Q12929 822 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 FADDQ13158 208 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SQLEQ14534 574 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 ADRM1Q16186 407 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 PRAMEF8Q5VWM4 474 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 PRAMEF7Q5VXH5 474 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 C3orf33Q6P1S2 294 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 LSRQ86X29 649 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 PEX5LQ8IYB4 626 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC43A2Q8N370 569 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 MAL2Q969L2 176 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 ARL5BQ96KC2 179 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 SERINC1Q9NRX5 453 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 CALML5Q9NZT1 146 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 DCTN4Q9UJW0 460 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 OSGIN1Q9UJX0 560 aa12.53□□□□□ -0.4
RTFDC1-204ENST00000449062 CADP27708 2225 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 CFAP73A6NFT4 308 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 CYTIPO60759 359 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 PLGP00747 810 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 BCHEP06276 602 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 THBDP07204 575 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 THBS1P07996 1170 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 POU2F1P14859 743 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 FKBP2P26885 142 aaKnown RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 LOXP28300 417 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 CPOXP36551 454 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 DIO1P49895 249 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 CRISP3P54108 245 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 CTBP2P56545 445 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 H3F3AP84243 136 aa12.52□□□□□ -0.41
RTFDC1-204ENST00000449062 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms