RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 HNRNPCL4P0DMR1 293 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 BMP2P12643 396 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 FADDQ13158 208 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 GNA13Q14344 377 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 C3orf33Q6P1S2 294 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF836Q6ZNA1 936 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 FCRLAQ7L513 359 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 GRINAQ7Z429 371 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 C10orf111Q8N326 155 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 ABHD3Q8WU67 409 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 NRGNQ92686 78 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 DACH2Q96NX9 599 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 SIKE1Q9BRV8 207 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 SLC39A3Q9BRY0 314 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 RAD21L1Q9H4I0 556 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 A4GALTQ9NPC4 353 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 CHRNA9Q9UGM1 479 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 NDRG3Q9UGV2 375 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 TRIM33Q9UPN9 1127 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 CHST2Q9Y4C5 530 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 CREBBPQ92793 2442 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
PRPF40A-203ENST00000448428 IGHV3-15A0A0B4J1V0 119 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 SH3D21A4FU49 640 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CDHR4A6H8M9 788 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 TMEM247A6NEH6 219 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CFAP73A6NFT4 308 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ENO4A6NNW6 628 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 FAAHO00519 579 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 GKN3PP0CG01 181 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 TFPIP10646 304 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 POU2F1P14859 743 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 KLK2P20151 261 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CCNA2P20248 432 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 AGTR1P30556 359 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 UGT2B10P36537 528 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ACAA2P42765 397 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 KCNJ5P48544 419 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 DIO1P49895 249 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 EPS8Q12929 822 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 EXOC3L2Q2M3D2 409 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 SYT14P1Q58G82 188 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 METTL21CQ5VZV1 264 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 DLEU7Q6UYE1 221 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 NUFIP2Q7Z417 695 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CDH24Q86UP0 819 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 LSRQ86X29 649 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 TUSC5Q8IXB3 177 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CLIP4Q8N3C7 705 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 SLC25A43Q8WUT9 341 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ARL5BQ96KC2 179 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 TMEM120AQ9BXJ8 343 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 OR11A1Q9GZK7 315 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 IKZF5Q9H5V7 419 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ITGB1BP2Q9UKP3 347 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF232Q9UNY5 417 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF443Q9Y2A4 671 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 LRBAP50851 2863 aa11.36□□□□□ -0.59
PRPF40A-203ENST00000448428 UQCRHLA0A096LP55 91 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 C16orf97H3BN30 126 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 SULT2B1O00204 365 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 PGM3O95394 542 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 YES1P07947 543 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 THBS1P07996 1170 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 GPX2P18283 190 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 PPIBP23284 216 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 TACR3P29371 465 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 SLC1A3P43003 542 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 HTR3AP46098 478 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 GUCY1A3Q02108 690 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 LARS2Q15031 903 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 LIN52Q52LA3 116 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 RUNDC3AQ59EK9 446 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 TMEM201Q5SNT2 666 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 PRAMEF8Q5VWM4 474 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 PRAMEF7Q5VXH5 474 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 ANKRD34AQ69YU3 496 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 C22orf34Q6ZV56 151 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 CDC20BQ86Y33 519 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 ZNF440Q8IYI8 595 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 DNAJA3Q96EY1 480 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 SPATA9Q9BWV2 254 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 RSPO3Q9BXY4 272 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 KLHL4Q9C0H6 718 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 ADAM19Q9H013 955 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 LIME1Q9H400 295 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 GP6Q9HCN6 339 aa11.35□□□□□ -0.59
PRPF40A-203ENST00000448428 FGFR1OP2Q9NVK5 253 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms