RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 B4GALT7Q9UBV7 327 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 DKKL1Q9UK85 242 aa17.73■□□□□ 0.43
SGCE-207ENST00000447873 A0A087WUU8 490 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 A0A087WZY1 265 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 SH3PXD2BA1X283 911 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 OR10H3O60404 316 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 CD97P48960 835 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 MEOX1P50221 254 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 POLR2HP52434 150 aaKnown RBP17.72■□□□□ 0.43
SGCE-207ENST00000447873 MERTKQ12866 999 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 TOMM20Q15388 145 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 POMZP3Q6PJE2 187 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 TBPL2Q6SJ96 375 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 WDR88Q6ZMY6 472 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 ATG4DQ86TL0 474 aaPredicted RBP17.72■□□□□ 0.43
SGCE-207ENST00000447873 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 OR10G2Q8NGC3 310 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 TMEM255BQ8WV15 326 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 DTNBP1Q96EV8 351 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 ABHD17AQ96GS6 310 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 FUZQ9BT04 418 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 COQ10BQ9H8M1 238 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 C12orf10Q9HB07 376 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 C15orf41Q9Y2V0 281 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 PCDHGB6Q9Y5F9 930 aa17.72■□□□□ 0.43
SGCE-207ENST00000447873 A0A087WUJ7 227 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 NTN1O95631 604 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 HK1P19367 917 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 PTNP21246 168 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 PRKACGP22612 351 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 TCEA1P23193 301 aaKnown RBP17.71■□□□□ 0.43
SGCE-207ENST00000447873 CXCR1P25024 350 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 GCKP35557 465 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 FOXF1Q12946 379 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 TTC33Q6PID6 262 aaPredicted RBP17.71■□□□□ 0.43
SGCE-207ENST00000447873 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.71■□□□□ 0.43
SGCE-207ENST00000447873 LINC00471Q8N535 108 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 OR4K5Q8NGD3 323 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 TMEM239Q8WW34 195 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 ZBTB8AQ96BR9 441 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 MRGPRX4Q96LA9 322 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 HS6ST2Q96MM7 605 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 KLHL4Q9C0H6 718 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 OSGIN1Q9UJX0 560 aa17.71■□□□□ 0.43
SGCE-207ENST00000447873 NCKAP5O14513 1909 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 ETV2O00321 342 aaPredicted RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 SOCS2O14508 198 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RASAL1O95294 804 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 PDGFAP04085 211 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RFPL3SP0C7P2 107 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 GDF1P27539 372 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RFC3P40938 356 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 EIF1P41567 113 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 RBM34P42696 430 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 PLGLB1Q02325 96 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 LINC00114Q6XXX2 140 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 FAM98AQ8NCA5 519 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 SLC29A1Q99808 456 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 ARHGAP9Q9BRR9 750 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 TTTY12Q9BZ98 90 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 VCXQ9H320 206 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 KIF17Q9P2E2 1029 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 FREM3P0C091 2139 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 CACNA1GO43497 2377 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 TMED7-TICAM2A0A0A6YYA0 188 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 ARRDC5A6NEK1 342 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 EI24O14681 340 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 TRAPPC6AO75865 159 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 CCNA2P20248 432 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 SRD5A2P31213 254 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 IFNGR2P38484 337 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 VHLP40337 213 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 APOBEC1P41238 236 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 DLX5P56178 289 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 SLC25A53Q5H9E4 307 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 MBOAT2Q6ZWT7 520 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RNF113BQ8IZP6 322 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 ATG16L2Q8NAA4 619 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 ZFP62Q8NB50 900 aaPredicted RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 OR9Q2Q8NGE9 314 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 MAGEE2Q8TD90 523 aaPredicted RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 SLC39A7Q92504 469 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 FEVQ99581 238 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 NPAS1Q99742 590 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RBM4BQ9BQ04 359 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 ZNF426Q9BUY5 554 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RBM4Q9BWF3 364 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 OSBPL10Q9BXB5 764 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 GABARAPL1Q9H0R8 117 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 UBQLN3Q9H347 655 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 C8orf4Q9NR00 106 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 RPH3AQ9Y2J0 694 aaPredicted RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 TMED7Q9Y3B3 224 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 MED31Q9Y3C7 131 aa17.7■□□□□ 0.42
SGCE-207ENST00000447873 DSPP15924 2871 aaKnown RBP17.7■□□□□ 0.42
SGCE-207ENST00000447873 MPDZO75970 2070 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 SHISA8B8ZZ34 492 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 K7EM74 188 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 KPNA4O00629 521 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 ZIC3O60481 467 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms