RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SMIM19Q96E16 107 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 MAP6Q96JE9 813 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 ZFP3Q96NJ6 502 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 ASB16Q96NS5 453 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 MAT2BQ9NZL9 334 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 FBXL4Q9UKA2 621 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 DAPP1Q9UN19 280 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 A0A087WV62 115 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 A0A1W2PRG6 482 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 GATBO75879 557 aaKnown RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SNTB2Q13425 540 aaKnown RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 RUNX2Q13950 521 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 CDK5R1Q15078 307 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 LGALSLQ3ZCW2 172 aaPredicted RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SMUG1Q53HV7 270 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 FCRLBQ6BAA4 426 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 GPR139Q6DWJ6 353 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 RTL4Q6ZR62 310 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 CDRT4Q8N9R6 151 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 CYB561A3Q8NBI2 242 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 FAM98AQ8NCA5 519 aaKnown RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF559Q9BR84 538 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 GSDMCQ9BYG8 508 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 CRISPLD2Q9H0B8 497 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 EVA1AQ9H8M9 152 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 BRD7Q9NPI1 651 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 DLL4Q9NR61 685 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 FBXO34Q9NWN3 711 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SCP2D1Q9UJQ7 156 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SLC22A7Q9Y694 548 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 B8ZZF3 427 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF593O00488 134 aaPredicted RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 PPP1R3DO95685 299 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ADH1BP00325 375 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 IFNGP01579 166 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ANKRD34CP0C6C1 535 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 C5AR1P21730 350 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ACTA2P62736 377 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ACTG2P63267 376 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ARHGAP11AQ6P4F7 1023 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ZCCHC12Q6PEW1 402 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 COX18Q8N8Q8 333 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 OR4E2Q8NGC2 313 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 OR51A7Q8NH64 312 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SMAP2Q8WU79 429 aaPredicted RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 LCN9Q8WX39 176 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 LRFN5Q96NI6 719 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 SERTAD3Q9UJW9 196 aa17.62■□□□□ 0.41
SDCBP-204ENST00000447182 MRPS7Q9Y2R9 242 aaKnown RBP17.62■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF749O43361 778 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 NARSO43776 548 aaKnown RBP17.61■□□□□ 0.41
SDCBP-204ENST00000447182 B3GALT2O43825 422 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 AK1P00568 194 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 TYRP1P17643 537 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 GDI2P50395 445 aaKnown RBP17.61■□□□□ 0.41
SDCBP-204ENST00000447182 PLAURQ03405 335 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 FBXO42Q6P3S6 717 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-204ENST00000447182 SMARCD2Q92925 531 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-204ENST00000447182 MS4A3Q96HJ5 214 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF426Q9BUY5 554 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 TMEM27Q9HBJ8 222 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 ADAP2Q9NPF8 381 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 KCNN3Q9UGI6 736 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 MOSPD1Q9UJG1 213 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 CLEC4AQ9UMR7 237 aa17.61■□□□□ 0.41
SDCBP-204ENST00000447182 PCDHGA9Q9Y5G4 932 aaKnown RBP17.61■□□□□ 0.41
SDCBP-204ENST00000447182 A0A0B4J203 849 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 A0A0B4J2E0 115 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 A0A1B0GTQ1 180 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 LOC105371267A0A1B0GV96 52 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 A0A1B0GX12 115 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 A0A1W2PP55 124 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 MEN1O00255 615 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 IFNA7P01567 189 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 PDGFAP04085 211 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 WNT1P04628 370 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 ATP1B1P05026 303 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 DNASE1P24855 282 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SLC6A6P31641 620 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 MAP3K8P41279 467 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 RPS11P62280 158 aaKnown RBP eCLIP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 RPS21P63220 83 aaKnown RBP17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SGCGQ13326 291 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SNTA1Q13424 505 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 FHL1Q13642 323 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 DEFB134Q4QY38 66 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 UBE2NLQ5JXB2 153 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 CLLU1Q5K131 121 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 WDR45BQ5MNZ6 344 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 SEZ6L2Q6UXD5 910 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NXPE2Q96DL1 559 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 PELI1Q96FA3 418 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NUP50Q9UKX7 468 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 ICAM5Q9UMF0 924 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NPIPA5A0A0B4J1W7 369 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 NPIPA7E9PJI5 369 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 BRINP1O60477 761 aa17.6■□□□□ 0.41
SDCBP-204ENST00000447182 ITGA10O75578 1167 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms