RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PCNX3Q9H6A9 2034 aa16■□□□□ 0.15
SMC6-206ENST00000446852 SCDO00767 359 aa16■□□□□ 0.15
SMC6-206ENST00000446852 IGHA1P01876 353 aa16■□□□□ 0.15
SMC6-206ENST00000446852 HPGDP15428 266 aa16■□□□□ 0.15
SMC6-206ENST00000446852 CPEP16870 476 aa16■□□□□ 0.15
SMC6-206ENST00000446852 GPR143P51810 404 aa16■□□□□ 0.15
SMC6-206ENST00000446852 COPZ1P61923 177 aa16■□□□□ 0.15
SMC6-206ENST00000446852 FAAH2Q6GMR7 532 aa16■□□□□ 0.15
SMC6-206ENST00000446852 EID2Q8N6I1 236 aa16■□□□□ 0.15
SMC6-206ENST00000446852 LRRC17Q8N6Y2 441 aa16■□□□□ 0.15
SMC6-206ENST00000446852 DNAJA4Q8WW22 397 aaPredicted RBP16■□□□□ 0.15
SMC6-206ENST00000446852 S100ZQ8WXG8 99 aa16■□□□□ 0.15
SMC6-206ENST00000446852 ZNF524Q96C55 264 aa16■□□□□ 0.15
SMC6-206ENST00000446852 KLHDC3Q9BQ90 382 aa16■□□□□ 0.15
SMC6-206ENST00000446852 MESP1Q9BRJ9 268 aa16■□□□□ 0.15
SMC6-206ENST00000446852 RTN4RQ9BZR6 473 aa16■□□□□ 0.15
SMC6-206ENST00000446852 WDR12Q9GZL7 423 aaKnown RBP16■□□□□ 0.15
SMC6-206ENST00000446852 NXF2Q9GZY0 626 aaKnown RBP16■□□□□ 0.15
SMC6-206ENST00000446852 MMP27Q9H306 513 aa16■□□□□ 0.15
SMC6-206ENST00000446852 SYNDIG1Q9H7V2 258 aa16■□□□□ 0.15
SMC6-206ENST00000446852 H2AFY2Q9P0M6 372 aaPredicted RBP16■□□□□ 0.15
SMC6-206ENST00000446852 STUB1Q9UNE7 303 aa16■□□□□ 0.15
SMC6-206ENST00000446852 PNMA8CA0A1B0GUJ8 204 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 PATE3B3GLJ2 98 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 J3QRE1 110 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 LRRTM2O43300 516 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 ICOSLGO75144 302 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 PSMA1P25786 263 aaKnown RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■□□□□ 8.8
SMC6-206ENST00000446852 PRPF38BQ5VTL8 546 aaKnown RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 GID4Q8IVV7 300 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 ZNF440Q8IYI8 595 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 FAM181AQ8N9Y4 354 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 OR4D9Q8NGE8 314 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 OR51G2Q8NGK0 314 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 OR1N1Q8NGS0 311 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 PTP4A1Q93096 173 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 KISS1RQ969F8 398 aaPredicted RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 WWTR1Q9GZV5 400 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 ICAM5Q9UMF0 924 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 EXPH5Q8NEV8 1989 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 A0A0C4DFX4 3053 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 hCG_2014768A0A024R1R8 64 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 FAM86C2PA6NEL3 165 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 LALBAP00709 142 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 MST1P26927 711 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 NOS3P29474 1203 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 SLC9A3P48764 834 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 CCR4P51679 360 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 NR0B1P51843 470 aaKnown RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 INAQ16352 499 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 RTL4Q6ZR62 310 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 MEPCEQ7L2J0 689 aaKnown RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 SLC37A3Q8NCC5 494 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 STT3BQ8TCJ2 826 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 SLC7A5P2Q9GIP4 190 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 ERVK13-1Q9NX77 482 aa15.99■□□□□ 0.15
SMC6-206ENST00000446852 YARS2Q9Y2Z4 477 aaKnown RBP15.99■□□□□ 0.15
SMC6-206ENST00000446852 BDP1A6H8Y1 2624 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 IGKV1D-42A0A075B6H8 117 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 ACY1Q03154 408 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 PLPP5Q8NEB5 264 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 OIT3Q8WWZ8 545 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 SGTBQ96EQ0 304 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 ART5Q96L15 291 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 SECISBP2Q96T21 854 aaKnown RBP15.98■□□□□ 0.15
SMC6-206ENST00000446852 ARHGAP9Q9BRR9 750 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 TGIF2Q9GZN2 237 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 C6orf62Q9GZU0 229 aaPredicted RBP15.98■□□□□ 0.15
SMC6-206ENST00000446852 COPS7AQ9UBW8 275 aa15.98■□□□□ 0.15
SMC6-206ENST00000446852 IGHV3-20A0A0C4DH32 117 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 C17orf51A8MQB3 221 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 ZNF264O43296 627 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 REM1O75628 298 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 DCAF7P61962 342 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 CRMP1Q14194 572 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 ZNF791Q3KP31 576 aaPredicted RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 PEAR1Q5VY43 1037 aaPredicted RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 PWWP2BQ6NUJ5 590 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 GDPGP1Q6ZNW5 385 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 RABEPKQ7Z6M1 372 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 CYB561A3Q8NBI2 242 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 OR9Q1Q8NGQ5 310 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 TMEM203Q969S6 136 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 EXOSC3Q9NQT5 275 aaKnown RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 TNFRSF10DQ9UBN6 386 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 B3GNT3Q9Y2A9 372 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 A3GALT2U3KPV4 340 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 IGLV3-12A0A075B6K2 115 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 PRR23D1E9PI22 279 aaPredicted RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 MAGEB3O15480 346 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 TSPAN19P0C672 248 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 PRR23D2P0DMB1 279 aaPredicted RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 CLUP10909 449 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 SLC6A6P31641 620 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 ATP6V1E1P36543 226 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 SIGLEC14Q08ET2 396 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 ITGADQ13349 1161 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 TPBGQ13641 420 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms