RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 A0A1B0GVL5 298 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 ENSAO43768 121 aaKnown RBP5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 DNAJA2O60884 412 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 ADRA1DP25100 572 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 LIPAP38571 399 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 FOXA1P55317 472 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 UBE2NP61088 152 aaKnown RBP5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 SLC25A3Q00325 362 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 NAE1Q13564 534 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 E2F2Q14209 437 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 KCNJ11Q14654 390 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 CTSL3PQ5NE16 218 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 AVPI1Q5T686 147 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 TMEM154Q6P9G4 183 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 PALM2Q8IXS6 379 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 PRELID2Q8N945 189 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 ZFP90Q8TF47 636 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 LRGUKQ96M69 825 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 MAPKAP1Q9BPZ7 522 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 FAM234AQ9H0X4 552 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 NANOGQ9H9S0 305 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 CYSLTR2Q9NS75 346 aa5.22□□□□□ -1.57
BRAFP1-201ENST00000445336 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.57
BRAFP1-201ENST00000445336 IGHV2OR16-5A0A0B4J2B6 119 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 A0A1B0GW55 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 IQCF5A8MTL0 148 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 CD55P08174 381 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 HIST1H2AGP0C0S8 130 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L2P0CJ85 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L3P0CJ86 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L5P0CJ88 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L6P0CJ89 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L7P0CJ90 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 HIST1H2ADP20671 130 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 S1PR1P21453 382 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SAT1P21673 171 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 GATA4P43694 442 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 PLPPR5Q32ZL2 321 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4L9Q6RFH8 374 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DGAT2L6Q6ZPD8 337 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SDCCAG8Q86SQ7 713 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 LRRC28Q86X40 367 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 MRPL41Q8IXM3 137 aaKnown RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ACOT4Q8N9L9 421 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 UBE2E3Q969T4 207 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ZHX1-C8orf76Q96EF9 292 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 WDR34Q96EX3 536 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 HIST1H2AHQ96KK5 128 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 HIST1H2AJQ99878 128 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 H2AFJQ9BTM1 129 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 MRPL37Q9BZE1 423 aaKnown RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 EGLN1Q9GZT9 426 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 CNOT10Q9H9A5 744 aaKnown RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 KCNK9Q9NPC2 374 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 TMEM45AQ9NWC5 275 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 DUX4Q9UBX2 424 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ICAM5Q9UMF0 924 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 NOSIPQ9Y314 301 aaKnown RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ANKDD1BA6NHY2 528 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SEMA3DO95025 777 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 CALCRP30988 508 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 NPY4RP50391 375 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ZNF41P51814 821 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 CSNK2A1P68400 391 aaPredicted RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 PRAMEP78395 509 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 PRR5P85299 388 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SELENBP1Q13228 472 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 RBBP5Q15291 538 aaKnown RBP5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 AP5B1Q2VPB7 878 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 TMIGD1Q6UXZ0 262 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ZDHHC23Q8IYP9 409 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 LILRA2Q8N149 483 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 BIRC8Q96P09 236 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SRXN1Q9BYN0 137 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 ISCUQ9H1K1 167 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 SERTAD4Q9NUC0 356 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 MIOXQ9UGB7 285 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 CTNND2Q9UQB3 1225 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 TCAF1Q9Y4C2 921 aa5.21□□□□□ -1.58
BRAFP1-201ENST00000445336 AP3B1O00203 1094 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 C1GALT1C1LP0DN25 315 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 NDUFA8P51970 172 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 DUSP2Q05923 314 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 DHX9Q08211 1270 aaKnown RBP5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 SLC25A53Q5H9E4 307 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 MRNIPQ6NTE8 343 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 UGT3A1Q6NUS8 523 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 CRIP3Q6Q6R5 217 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 LARP4Q71RC2 724 aaKnown RBP eCLIP5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 GPR180Q86V85 440 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 PRR22Q8IZ63 422 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 UBE2J2Q8N2K1 259 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 ZNF527Q8NB42 609 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 SLC16A11Q8NCK7 471 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 ZNF675Q8TD23 568 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 TFAP2CQ92754 450 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 RHOXF2Q9BQY4 288 aa5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 SSBP3Q9BWW4 388 aaPredicted RBP5.2□□□□□ -1.58
BRAFP1-201ENST00000445336 ITPAQ9BY32 194 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms