RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ADAM11O75078 769 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 COL8A1P27658 744 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 GRNP28799 593 aaKnown RBP15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 AQP1P29972 269 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 PRKAR1BP31321 381 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 DLX5P56178 289 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 CARD18P57730 90 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 CTU2Q2VPK5 515 aaKnown RBP15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 RABL3Q5HYI8 236 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 NET1Q7Z628 596 aaPredicted RBP15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 LIX1LQ8IVB5 337 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 CLIP4Q8N3C7 705 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 FNDC9Q8TBE3 224 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 FIG4Q92562 907 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 CMTM5Q96DZ9 223 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 SFXN3Q9BWM7 321 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 MYLK2Q9H1R3 596 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 PRDM4Q9UKN5 801 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 ARL2BPQ9Y2Y0 163 aa15.68■□□□□ 0.1
SMARCAL1-209ENST00000444508 AIM2O14862 343 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 IL18BPO95998 194 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 GKN3PP0CG01 181 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SHC1P29353 583 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SLC1A3P43003 542 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 INTS11Q5TA45 600 aaKnown RBP15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 EEF1A1P5Q5VTE0 462 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SP5Q6BEB4 398 aaPredicted RBP15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 TREML1Q86YW5 311 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 ARMC8Q8IUR7 673 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 ZZZ3Q8IYH5 903 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 GCNT2Q8N0V5 402 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SLC25A43Q8WUT9 341 aaPredicted RBP15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 OSTF1Q92882 214 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SLC35B4Q969S0 331 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 LRRC46Q96FV0 321 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 REXO5Q96IC2 774 aaKnown RBP15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 PIF1Q9H611 641 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 EFCAB1Q9HAE3 211 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 CTPS2Q9NRF8 586 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 CHRNA9Q9UGM1 479 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 SLC13A4Q9UKG4 626 aa15.67■□□□□ 0.1
SMARCAL1-209ENST00000444508 CRHP06850 196 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 FKBP2P26885 142 aaKnown RBP15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 PCGF2P35227 344 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 POLR2HP52434 150 aaKnown RBP15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 AGFG1P52594 562 aaKnown RBP15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 FOXF2Q12947 444 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 HIST2H2BCQ6DN03 193 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 DHRS4L2Q6PKH6 230 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 ARPINQ7Z6K5 226 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 PIGWQ7Z7B1 504 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 MED12LQ86YW9 2145 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 CADM2Q8N3J6 435 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 CPNE4Q96A23 557 aaPredicted RBP15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 OR5B2Q96R09 309 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 RNF122Q9H9V4 155 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 KLHL28Q9NXS3 571 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 CHST2Q9Y4C5 530 aa15.66■□□□□ 0.1
SMARCAL1-209ENST00000444508 UNC79Q9P2D8 2635 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 INTS1Q8N201 2190 aaKnown RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 C19orf84I3L1E1 186 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 DCTN3O75935 186 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 PLGP00747 810 aaPredicted RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 TFPIP10646 304 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 TACR3P29371 465 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 PRDX6P30041 224 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 ACAA2P42765 397 aaKnown RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 ASCL1P50553 236 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 PCBP3P57721 371 aaKnown RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 VMACQ2NL98 169 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 SYT14P1Q58G82 188 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 WBP2NLQ6ICG8 309 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 ERICH5Q6P6B1 374 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 PATL1Q86TB9 770 aaKnown RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 CNEP1R1Q8N9A8 125 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 RELL2Q8NC24 303 aaPredicted RBP15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 CCT8L2Q96SF2 557 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 FAM53CQ9NYF3 392 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 AP3M1Q9Y2T2 418 aa15.65■□□□□ 0.1
SMARCAL1-209ENST00000444508 TMED7-TICAM2A0A0A6YYA0 188 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 A0A1W2PNR3 127 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 A0A1W2PNV4 684 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 EEF1E1-BLOC1S5C9J1V9 151 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 EEF1E1O43324 174 aaKnown RBP15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 FRS3O43559 492 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 AQP8O94778 261 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 PRG2P13727 222 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 COX6B1P14854 86 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 CCNA2P20248 432 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 CXCR1P25024 350 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 CLK1P49759 484 aaKnown RBP15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 NUDT2P50583 147 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 GZMMP51124 257 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 MAP2K6P52564 334 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 TFF3Q07654 80 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 ZNF239Q16600 458 aaKnown RBP15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 GTF2IRD2BQ6EKJ0 949 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 GTF2IRD2Q86UP8 949 aa15.64■□□□□ 0.09
SMARCAL1-209ENST00000444508 CALHM3Q86XJ0 350 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms