RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SFTPDP35247 375 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 GIPRP48546 466 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 YIF1BQ5BJH7 314 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 Q5BKY6 102 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 C1orf94Q6P1W5 598 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ABHD17CQ6PCB6 329 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ASB18Q6ZVZ8 466 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 OR51L1Q8NGJ5 315 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SLC7A13Q8TCU3 470 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 TSEN15Q8WW01 171 aaKnown RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 TCTN2Q96GX1 697 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SAMD8Q96LT4 415 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 MS4A4EQ96PG1 132 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CDCP1Q9H5V8 836 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 RNF121Q9H920 327 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ACSS1Q9NUB1 689 aaPredicted RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 PFDN2Q9UHV9 154 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 DOCK4Q8N1I0 1966 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SCN3AQ9NY46 2000 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 A0A1W2PPK0 400 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 A0A1W2PR48 441 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ORC5O43913 435 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 PRAMEF2O60811 474 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SDC2P34741 201 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 BSGP35613 385 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ARHGDIBP52566 201 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ATP12AP54707 1039 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.837e-7■□□□□ 8.4
TOP3B-210ENST00000444502 OR2G6Q5TZ20 316 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CDRT4Q8N9R6 151 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CYB561A3Q8NBI2 242 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 COQ8AQ8NI60 647 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 DUSP21Q9H596 190 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 HPF1Q9NWY4 346 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SRPK3Q9UPE1 567 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 TMEM5Q9Y2B1 443 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SCN5AQ14524 2016 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 A0A0G2JMP0 313 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SPTY2D1-AS1A0A0U1RR47 76 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SRPX2O60687 465 aaPredicted RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 RCBTB2O95199 551 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CELA2BP08218 269 aaPredicted RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CPMP14384 443 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 MTNR1AP48039 350 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ZNF91Q05481 1191 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SERTAD2Q14140 314 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■□□□□ 9.7
TOP3B-210ENST00000444502 HSD17B12Q53GQ0 312 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 KLHL24Q6TFL4 600 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 TMEM184AQ6ZMB5 413 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SLC16A11Q8NCK7 471 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 NAXEQ8NCW5 288 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 OSTF1Q92882 214 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 GPER1Q99527 375 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SLIRPQ9GZT3 109 aaKnown RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 SLC6A15Q9H2J7 730 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 KCNN2Q9H2S1 579 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 USP36Q9P275 1121 aaKnown RBP9.85□□□□□ -0.83
TOP3B-210ENST00000444502 ZNF639Q9UID6 485 aa9.85□□□□□ -0.83
TOP3B-210ENST00000444502 CCDC88CQ9P219 2028 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 TRAV6A0A075B6T7 132 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SH3D21A4FU49 640 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 PSMD9O00233 223 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SLC22A5O76082 557 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 RD3LP0DJH9 198 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CCNOP22674 350 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 ELAVL4P26378 380 aaKnown RBP9.84□□□□□ -0.83
TOP3B-210ENST00000444502 TNFSF8P32971 234 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SLC6A9P48067 706 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SRYQ05066 204 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 P4HA3Q7Z4N8 544 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 KLBQ86Z14 1044 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 MFSD9Q8NBP5 474 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 OR2A1Q8NGT9 310 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 MARC2Q969Z3 335 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SLC41A3Q96GZ6 507 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 C7orf34Q96L11 122 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 ERMAPQ96PL5 475 aaPredicted RBP9.84□□□□□ -0.83
TOP3B-210ENST00000444502 WACQ9BTA9 647 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SAP130Q9H0E3 1048 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 ACOXLQ9NUZ1 547 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 WNT16Q9UBV4 365 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CLEC2DQ9UHP7 191 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 TLCD2A6NGC4 264 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CD8B2A6NJW9 211 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 HMGN4O00479 90 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 SIGLEC6O43699 453 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 AKAP8O43823 692 aaKnown RBP9.84□□□□□ -0.83
TOP3B-210ENST00000444502 RENP00797 406 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CAPNS1P04632 268 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CD8BP10966 210 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 NAGAP17050 411 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 TBCEQ15813 527 aaPredicted RBP9.84□□□□□ -0.83
TOP3B-210ENST00000444502 FAM209BQ5JX69 171 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 PRAMEF17Q5VTA0 474 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 MEDAGQ5VYS4 303 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 CARD17Q5XLA6 110 aa9.84□□□□□ -0.83
TOP3B-210ENST00000444502 PLBD1Q6P4A8 553 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms