RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TCAIMQ8N3R3 496 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 PRSS33Q8NF86 280 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 PROKR2Q8NFJ6 384 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 KIFAP3Q92845 792 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 CD101Q93033 1021 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF524Q96C55 264 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 CNRIP1Q96F85 164 aaPredicted RBP4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 OR5B2Q96R09 309 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 MCRIP2Q9BUT9 160 aaKnown RBP4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 DEPPQ9NTK1 212 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 GPATCH2LQ9NWQ4 482 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 NUDT4Q9NZJ9 180 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 MLXQ9UH92 298 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 KCNG2Q9UJ96 466 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 ERVW-1Q9UQF0 538 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 NTNG1Q9Y2I2 539 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 MROH7-TTC4A0A0A0MT08 1334 aa4.36□□□□□ -1.71
TM9SF3-202ENST00000443638 KCNE1BA0A087WTH5 132 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 A0A087WW49 117 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 KBTBD11-OT1A0A1B0GTJ5 212 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 PLSCR5A0PG75 271 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CCT8L1PA6NM43 557 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 HSD17B6O14756 317 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 BCKDKO14874 412 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 OAZ2O95190 189 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TSPAN13O95857 204 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 MBP02144 154 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 MMP1P03956 469 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 FCGR3AP08637 254 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CD48P09326 243 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 PRSS56P0CW18 603 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CD1DP15813 335 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 POLR2EP19388 210 aaKnown RBP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CALML3P27482 149 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 VHLP40337 213 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 GPR4P46093 362 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 UQCRFS1P47985 274 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CSRP3P50461 194 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TMEM50BP56557 158 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF154Q13106 437 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CUL1Q13616 776 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 NECTIN1Q15223 517 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TWF2Q6IBS0 349 aaKnown RBP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 OR8G2PQ6IF36 304 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 OR52W1Q6IF63 320 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 SAMD12Q8N8I0 201 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 C8orf31Q8N9H6 132 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 PLPPR1Q8TBJ4 325 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 GPR151Q8TDV0 419 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 SETD7Q8WTS6 366 aaKnown RBP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 RAB3CQ96E17 227 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CERS2Q96G23 380 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CLCC1Q96S66 551 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TMEM175Q9BSA9 504 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 LIME1Q9H400 295 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 NHEJ1Q9H9Q4 299 aaPredicted RBP4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CUTCQ9NTM9 273 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 NUDT15Q9NV35 164 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 EHFQ9NZC4 300 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 CLN8Q9UBY8 286 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 NUP50Q9UKX7 468 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 PPP1R3CQ9UQK1 317 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 NEURL4Q96JN8 1562 aa4.35□□□□□ -1.71
TM9SF3-202ENST00000443638 TRBV9A0A0B4J1U6 114 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 BCLAF3A2AJT9 711 aaKnown RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 C12orf71A8MTZ7 269 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF99A8MXY4 864 aaPredicted RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PCDH7O60245 1069 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 UGT2B17O75795 530 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 NUDT14O95848 222 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PRSS1P07477 247 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF24P17028 368 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 SDC1P18827 310 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 GTF2E2P29084 291 aaKnown RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 OPRL1P41146 370 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 LIM2P55344 173 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 XRCC4Q13426 336 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 GRB7Q14451 532 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 FASTKD3Q14CZ7 662 aaKnown RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 CCL14Q16627 93 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 DGUOKQ16854 277 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 CARD16Q5EG05 197 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ACER2Q5QJU3 275 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 FAM219BQ5XKK7 198 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PDPK2PQ6A1A2 396 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 H3F3CQ6NXT2 135 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 C19orf48Q6RUI8 117 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 LRRC31Q6UY01 552 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 COMTD1Q86VU5 262 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 RAB42Q8N4Z0 105 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 TRIML2Q8N7C3 387 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 FAM86B1Q8N7N1 296 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ASCC1Q8N9N2 400 aaKnown RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 GATSQ8NAP1 163 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 SUMF1Q8NBK3 374 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 OR2T33Q8NG76 320 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 OR52H1Q8NGJ2 320 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms