RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PXYLP1Q8TE99 480 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GAL3ST1Q99999 423 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 KLF2Q9Y5W3 355 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 TSPAN6O43657 245 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 PRICKLE3O43900 615 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 EGFP01133 1207 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 TSPAN31Q12999 210 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 FAM180BQ6P0A1 224 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 TMEM71Q6P5X7 295 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 TMEM205Q6UW68 189 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 PRICKLE2Q7Z3G6 844 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SYT9Q86SS6 491 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 GPR32P1Q8NGA4 272 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.67□□□□□ -1.662e-6■■□□□ 13.3
HERC1-201ENST00000443617 SMG9Q9H0W8 520 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 PCDHB10Q9UN67 800 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 TOGARAM1Q9Y4F4 1720 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 hCG_1809904A0A1W2PP81 198 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 A0A1W2PR64 198 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 A0A1W2PRV1 198 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 MEIS3P2A8K0S8 358 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 K7ERQ8 282 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SCAMP1O15126 338 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RECKO95980 971 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 DCTDP32321 178 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 GAS6Q14393 721 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 VWA2Q5GFL6 755 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 OR52W1Q6IF63 320 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 OR6T1Q8NGN1 323 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 C4orf36Q96KX1 117 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 NPDC1Q9NQX5 325 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 SIGLEC5O15389 551 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SNAI1O95863 264 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 CDK2P24941 298 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 CORO1AP31146 461 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 POLR2LP62875 67 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 SIGLEC14Q08ET2 396 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 DECR1Q16698 335 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 LRRC37A5PQ49AS3 106 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF385BQ569K4 471 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 USP53Q70EK8 1073 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 PHYHIPQ92561 330 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SLC41A3Q96GZ6 507 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SDHAF3Q9NRP4 125 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SLC22A11Q9NSA0 550 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 GPATCH2Q9NW75 528 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SURF4O15260 269 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RPP14O95059 124 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 CR2P20023 1033 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 DDX6P26196 483 aaKnown RBP eCLIP4.67□□□□□ -1.66
HERC1-201ENST00000443617 PRR5P85299 388 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 MICBQ29980 383 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RPL22L1Q6P5R6 122 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 OR4D9Q8NGE8 314 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 NOX4Q9NPH5 578 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 FAM96BQ9Y3D0 163 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ADH7P40394 386 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 AQP2P41181 271 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 OR1G1P47890 313 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 MPPE1Q53F39 396 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 AADACL4Q5VUY2 407 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 NECAB3Q96P71 396 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 WDR77Q9BQA1 342 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 TMEM27Q9HBJ8 222 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF629Q9UEG4 869 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 C17orf113A0A1B0GUU1 675 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SLC22A31A6NKX4 558 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SLC2A10O95528 541 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ADAM8P78325 824 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF585AQ6P3V2 769 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RBMS3Q6XE24 437 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 IL34Q6ZMJ4 242 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF627Q7L945 461 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 HAVCR1Q96D42 359 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 PCOLCE2Q9UKZ9 415 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 FARSAQ9Y285 508 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 TNFRSF10BO14763 440 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 TACSTD2P09758 323 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RAB40ALP0C0E4 278 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 SNRPD1P62314 119 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 ST3GAL3Q11203 375 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 GUCA2BQ16661 112 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF528Q3MIS6 628 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 PIP5KL1Q5T9C9 394 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ZNF227Q86WZ6 799 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 OR7G2Q8NG99 324 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RAB40AQ8WXH6 277 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RBPJLQ9UBG7 517 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 NOP16Q9Y3C1 178 aaKnown RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 PLEKHM1Q9Y4G2 1056 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.67□□□□□ -1.66
HERC1-201ENST00000443617 LRRC72A6NJI9 287 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 ETHE1O95571 254 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 OLFM2O95897 454 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 IGSF6O95976 241 aa4.67□□□□□ -1.66
HERC1-201ENST00000443617 RNF224P0DH78 156 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms