RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 TIGD2Q4W5G0 525 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 SPDYAQ5MJ70 313 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 KLHL24Q6TFL4 600 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 CASP12Q6UXS9 341 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 GPRIN3Q6ZVF9 776 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 MTDHQ86UE4 582 aaKnown RBP12.1□□□□□ -0.47
LINC00642-202ENST00000442515 CREG2Q8IUH2 290 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 TMCO5AQ8N6Q1 288 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 JADE3Q92613 823 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 CIDECQ96AQ7 238 aaPredicted RBP12.1□□□□□ -0.47
LINC00642-202ENST00000442515 KCNS3Q9BQ31 491 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 QRSL1Q9H0R6 528 aaKnown RBP12.1□□□□□ -0.47
LINC00642-202ENST00000442515 PYCARDQ9ULZ3 195 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 ZNF281Q9Y2X9 895 aa12.1□□□□□ -0.47
LINC00642-202ENST00000442515 H3BNH8 94 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 GPR171O14626 319 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 KLF11O14901 512 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 PDPK1O15530 556 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 WNT11O96014 354 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 MSMBP08118 114 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 SBK3P0C264 359 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 KHKP50053 298 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 SLC16A1P53985 500 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 KLHL26Q53HC5 615 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 SYT14P1Q58G82 188 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
LINC00642-202ENST00000442515 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 ANKRD26P1Q6NSI1 321 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 OR5W2Q8NH69 310 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 ARL8AQ96BM9 186 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 SLC38A2Q96QD8 506 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 LRRC37BQ96QE4 947 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 KCNA7Q96RP8 456 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
LINC00642-202ENST00000442515 KATNB1Q9BVA0 655 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 BTBD2Q9BX70 525 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
LINC00642-202ENST00000442515 ESM1Q9NQ30 184 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 UPB1Q9UBR1 384 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 WBP11Q9Y2W2 641 aaKnown RBP12.09□□□□□ -0.47
LINC00642-202ENST00000442515 TIMM22Q9Y584 194 aa12.09□□□□□ -0.47
LINC00642-202ENST00000442515 LYNX1G3V0Z9 82 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CCDC188H7C350 402 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 hCG_2039718K7EN88 272 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 GTPBP1O00178 669 aaKnown RBP12.08□□□□□ -0.48
LINC00642-202ENST00000442515 SUPT7LO94864 414 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 LYNX1P0DP58 116 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 ATP6V1C1P21283 382 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 SLC1A3P43003 542 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 IL1RL1Q01638 556 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CBFBQ13951 182 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 UNC50Q53HI1 259 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 C1QTNF12Q5T7M4 302 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-202ENST00000442515 ZNF614Q8N883 585 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CLDND2Q8NHS1 167 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 PIGXQ8TBF5 258 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 UBASH3BQ8TF42 649 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CDS1Q92903 461 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CHMP6Q96FZ7 201 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 SLC6A7Q99884 636 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 SUCNR1Q9BXA5 334 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 HOXD1Q9GZZ0 328 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 CDC42EP4Q9H3Q1 356 aaKnown RBP12.08□□□□□ -0.48
LINC00642-202ENST00000442515 NARFLQ9H6Q4 476 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 SLC7A10Q9NS82 523 aa12.08□□□□□ -0.48
LINC00642-202ENST00000442515 FBXO9Q9UK97 447 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-202ENST00000442515 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 CRYAAP02489 173 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 IGFBP1P08833 259 aaPredicted RBP12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ARAFP10398 606 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 MPGP29372 298 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 UBA52P62987 128 aaKnown RBP12.07□□□□□ -0.48
LINC00642-202ENST00000442515 FOXL1Q12952 345 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ZNF385BQ569K4 471 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ZNF678Q5SXM1 525 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 TSPO2Q5TGU0 170 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 CDC73Q6P1J9 531 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ZCCHC12Q6PEW1 402 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 CCDC103Q8IW40 242 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ZFP28Q8NHY6 868 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 SLC25A43Q8WUT9 341 aaPredicted RBP12.07□□□□□ -0.48
LINC00642-202ENST00000442515 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 DNAJA3Q96EY1 480 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 EGLN2Q96KS0 407 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 TMEM237Q96Q45 408 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 STACQ99469 402 aa12.07□□□□□ -0.48
LINC00642-202ENST00000442515 IQCGQ9H095 443 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms