RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 OIT3Q8WWZ8 545 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 CNOT9Q92600 299 aaKnown RBP6.74□□□□□ -1.33
COPS3-203ENST00000439936 ARSGQ96EG1 525 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 DTNBP1Q96EV8 351 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 ZNF583Q96ND8 569 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 DMRTA2Q96SC8 542 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 TREX2Q9BQ50 279 aaPredicted RBP6.74□□□□□ -1.33
COPS3-203ENST00000439936 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 PIF1Q9H611 641 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 TMEM38AQ9H6F2 299 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 KAT8Q9H7Z6 458 aaKnown RBP6.74□□□□□ -1.33
COPS3-203ENST00000439936 EFCAB1Q9HAE3 211 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 MED17Q9NVC6 651 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 CORO2BQ9UQ03 480 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 MEMO1Q9Y316 297 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 L3MBTL1Q9Y468 752 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 NCOA6Q14686 2063 aaPredicted RBP6.74□□□□□ -1.33
COPS3-203ENST00000439936 DSPPQ9NZW4 1301 aa6.74□□□□□ -1.33
COPS3-203ENST00000439936 SPENQ96T58 3664 aaKnown RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 A0A087WZY1 265 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 KDM4EB2RXH2 506 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 C5orf58C9J3I9 102 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 TPST1O60507 370 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ZG16O60844 167 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 EPPINO95925 133 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 LDLRP01130 860 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 HOXD4P09016 255 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 UBTFL6P0CB48 400 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 PEPDP12955 493 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ETS2P15036 469 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SLC6A2P23975 617 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PSMA4P25789 261 aaKnown RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 ACVR2AP27037 513 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PRDX6P30041 224 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 RYKP34925 604 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 CLK1P49759 484 aaKnown RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 LHX2P50458 406 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ZNF41P51814 821 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 SUCLG1P53597 346 aaKnown RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 CLDN15P56746 228 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SRYQ05066 204 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 RBBP4Q09028 425 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PMPCAQ10713 525 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SKP2Q13309 424 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 CDK5R2Q13319 367 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SCARB2Q14108 478 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 BCL2A1Q16548 175 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PLPPR5Q32ZL2 321 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 GCNT6Q5T4J0 391 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PRAMEF8Q5VWM4 474 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PRAMEF7Q5VXH5 474 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 RAET1LQ5VY80 246 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 TMEM211Q6ICI0 200 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 AAGABQ6PD74 315 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ENPP6Q6UWR7 440 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 NET1Q7Z628 596 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 CALHM3Q86XJ0 350 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 MRPL41Q8IXM3 137 aaKnown RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 CMIPQ8IY22 773 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ZZZ3Q8IYH5 903 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ULK2Q8IYT8 1036 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 MARVELD2Q8N4S9 558 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 FAM71CQ8NEG0 241 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 TOR1AIP2Q8NFQ8 470 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 BBS10Q8TAM1 723 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 WDR60Q8WVS4 1066 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 GIMAP1Q8WWP7 306 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 CMTM5Q96DZ9 223 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SFXN2Q96NB2 322 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 LRRC37BQ96QE4 947 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SH3GL1Q99961 368 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 ECSITQ9BQ95 431 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PIGQQ9BRB3 760 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 PRDM14Q9GZV8 571 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 TP63Q9H3D4 680 aaPredicted RBP6.73□□□□□ -1.33
COPS3-203ENST00000439936 ARL8BQ9NVJ2 186 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 RLIMQ9NVW2 624 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 USP22Q9UPT9 525 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 CAMK2AQ9UQM7 478 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 SLC35A3Q9Y2D2 325 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 IFT52Q9Y366 437 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 CHST2Q9Y4C5 530 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 DOCK7Q96N67 2140 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 RELNP78509 3460 aa6.73□□□□□ -1.33
COPS3-203ENST00000439936 HELZ2Q9BYK8 2649 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 CCT8L1PA6NM43 557 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 H0YC42 278 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 M0QX08 132 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 WDR1O75083 606 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 DCTN3O75935 186 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 OPN1LWP04000 364 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 PABPC4LP0CB38 370 aaKnown RBP6.72□□□□□ -1.33
COPS3-203ENST00000439936 RNF224P0DH78 156 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 GABRA1P14867 456 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ZNF708P17019 499 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 PRKCAP17252 672 aa6.72□□□□□ -1.33
COPS3-203ENST00000439936 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms