RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 FAM71F2Q6NXP2 309 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 FAHD2BQ6P2I3 314 aaPredicted RBP2.52□□□□□ -2.01
VPS41-207ENST00000439468 FRA10AC1Q70Z53 315 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 C16orf62Q7Z3J2 963 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 CADM2Q8N3J6 435 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 ATP6V0D2Q8N8Y2 350 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 ANKFN1Q8N957 763 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 FAM133AQ8N9E0 248 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 CATSPER1Q8NEC5 780 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 OR10H4Q8NGA5 316 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 ZNF564Q8TBZ8 553 aaPredicted RBP2.52□□□□□ -2.01
VPS41-207ENST00000439468 FAHD2AQ96GK7 314 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 KIR2DL4Q99706 377 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 MAPKAP1Q9BPZ7 522 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 C19orf24Q9BVV8 132 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 SPATA16Q9BXB7 569 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 IL36GQ9NZH8 169 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 B4GALT7Q9UBV7 327 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 WDR45Q9Y484 360 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 FLVCR1Q9Y5Y0 555 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 IQGAP1P46940 1657 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 DNMT1P26358 1616 aaKnown RBP2.52□□□□□ -2.01
VPS41-207ENST00000439468 LRRK1Q38SD2 2015 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 DIP2AQ14689 1571 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 CCDC88BA6NC98 1476 aa2.52□□□□□ -2.01
VPS41-207ENST00000439468 SCAF11Q99590 1463 aaKnown RBP2.52□□□□□ -2.01
VPS41-207ENST00000439468 RTEL1-TNFRSF6BF6WH68 1400 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 FHOD3Q2V2M9 1422 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 TRAPPC8Q9Y2L5 1435 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 IGHV2-70DA0A0C4DH43 119 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 LRP5LA4QPB2 252 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 ZFP92A6NM28 416 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 PP2D1A8MPX8 630 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 E7ENQ6 273 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SULT2B1O00204 365 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 TNFSF11O14788 317 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 CPLX1O14810 134 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 RS1O15537 224 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 MTX2O75431 263 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 ADCY5O95622 1261 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 IGHV3-23P01764 117 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 NCK1P16333 377 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 MMP11P24347 488 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 LAP3P28838 519 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 RBMXP38159 391 aaKnown RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 HLCSP50747 726 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 PPT1P50897 306 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 AP3M2P53677 418 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 RPS14P62263 151 aaKnown RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 RIPPLY1Q0D2K3 151 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 AANATQ16613 207 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 TPD52L1Q16890 204 aaPredicted RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 TATDN3Q17R31 274 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 ISXQ2M1V0 245 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SLC25A52Q3SY17 297 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 PRR30Q53SZ7 412 aaPredicted RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 SYT10Q6XYQ8 523 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 MOB1BQ7L9L4 216 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 VASH2Q86V25 355 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 C17orf82Q86X59 251 aaPredicted RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 TBC1D21Q8IYX1 336 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 C15orf54Q8N8G6 183 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 OR4D5Q8NGN0 318 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 OR1F12Q8NHA8 337 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SENP8Q96LD8 212 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 CNOT6LQ96LI5 555 aaKnown RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 IL4I1Q96RQ9 567 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SECISBP2Q96T21 854 aaKnown RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 ZNF184Q99676 751 aaPredicted RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 MCHR1Q99705 422 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 TXN2Q99757 166 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 OMDQ99983 421 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 GON7Q9BXV9 100 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 YTHDF1Q9BYJ9 559 aaKnown RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 NMUR2Q9GZQ4 415 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 RHBGQ9H310 441 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SMPD3Q9NY59 655 aaPredicted RBP2.51□□□□□ -2.01
VPS41-207ENST00000439468 B3GNT2Q9NY97 397 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 RNF14Q9UBS8 474 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 CELA1Q9UNI1 258 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 ABCG2Q9UNQ0 655 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 ERVW-1Q9UQF0 538 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 SCML2Q9UQR0 700 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 MAD1L1Q9Y6D9 718 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 FAM135BQ49AJ0 1406 aa2.51□□□□□ -2.01
VPS41-207ENST00000439468 K7N7A8 449 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 ARPC3O15145 178 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 SNNO75324 88 aaPredicted RBP2.5□□□□□ -2.01
VPS41-207ENST00000439468 LRATO95237 230 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 GNA14O95837 355 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 STSP08842 583 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 ZNF19P17023 458 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 HOXD10P28358 340 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 AQP1P29972 269 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 P2RY4P51582 365 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 STX17P56962 302 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 C1orf61Q13536 156 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 TRIM16LQ309B1 348 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 KRTAP13-3Q3SY46 172 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms