RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 OPN3Q9H1Y3 402 aaPredicted RBP22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 ARMC7Q9H6L4 198 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 GP6Q9HCN6 339 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 A4GALTQ9NPC4 353 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLC25A37Q9NYZ2 338 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 NDRG3Q9UGV2 375 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 LEF1Q9UJU2 399 aaPredicted RBP22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 CLEC4AQ9UMR7 237 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF232Q9UNY5 417 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 GMEB1Q9Y692 573 aa22.12■■□□□ 1.13
RAPGEF1-206ENST00000438647 CFAP73A6NFT4 308 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 C5orf58C9J3I9 102 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 FAAHO00519 579 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 THBS1P07996 1170 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 CD79BP40259 229 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 KCNJ5P48544 419 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 IDH2P48735 452 aaKnown RBP22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 DAZAP2Q15038 168 aaPredicted RBP22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 SYT14P1Q58G82 188 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 FCRLAQ7L513 359 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLC43A2Q8N370 569 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 LINC01560Q8TB33 94 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 TSPEARQ8WU66 669 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 ROBO4Q8WZ75 1007 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 DACH2Q96NX9 599 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 OR5B2Q96R09 309 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF385DQ9H6B1 395 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 FANCFQ9NPI8 374 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 VAPAQ9P0L0 249 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLAMF8Q9P0V8 285 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 CHRNA9Q9UGM1 479 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 IFT52Q9Y366 437 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 NDUFAF1Q9Y375 327 aa22.11■■□□□ 1.13
RAPGEF1-206ENST00000438647 A0A1W2PNR3 127 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 CDHR4A6H8M9 788 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 A6NNC1 897 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 EVPLLA8MZ36 301 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 ANGPT2O15123 496 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 CTAG2O75638 210 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 GOSR1O95249 250 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 POU2F1P14859 743 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 CSNK2A1P68400 391 aaPredicted RBP22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 RNF220Q5VTB9 566 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF474Q6S9Z5 364 aaPredicted RBP22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 MSRB3Q8IXL7 192 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF610Q8N9Z0 462 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 BBS10Q8TAM1 723 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 TMEM120AQ9BXJ8 343 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 BCL2L10Q9HD36 194 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 CTPS2Q9NRF8 586 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 PLSCR4Q9NRQ2 329 aa22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF443Q9Y2A4 671 aaPredicted RBP22.1■■□□□ 1.13
RAPGEF1-206ENST00000438647 VIMP08670 466 aaKnown RBP22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 NUDT7P0C024 238 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 CLK1P49759 484 aaKnown RBP22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 FAM27E3Q08E93 113 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 RPS26P11Q5JNZ5 115 aaPredicted RBP22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 TMEM201Q5SNT2 666 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 GCNT6Q5T4J0 391 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF836Q6ZNA1 936 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 STK32CQ86UX6 486 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 VRK2Q86Y07 508 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 ABHD3Q8WU67 409 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 TACO1Q9BSH4 297 aaKnown RBP22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 RASSF1Q9NS23 344 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 FGFR1OP2Q9NVK5 253 aa22.09■■□□□ 1.13
RAPGEF1-206ENST00000438647 MPDZO75970 2070 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 TRBV5-3A0A0A0MS03 114 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 FAM221AA4D161 298 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 SH3D21A4FU49 640 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 ENO4A6NNW6 628 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 AP3D1O14617 1153 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 ATP8B1O43520 1251 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 ADAM11O75078 769 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 PRKD3O94806 890 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 TFPIP10646 304 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 ENPP1P22413 925 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 AGTR1P30556 359 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 SLC1A3P43003 542 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 POLR2HP52434 150 aaKnown RBP22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 MAP2K6P52564 334 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 EPS8Q12929 822 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 TMPPEQ6ZT21 453 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 ZNF550Q7Z398 422 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 MAL2Q969L2 176 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 GPATCH1Q9BRR8 931 aaKnown RBP22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 SPATA9Q9BWV2 254 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 RLIMQ9NVW2 624 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 KLHL9Q9P2J3 617 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 KLHL13Q9P2N7 655 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 HDGFL3Q9Y3E1 203 aa22.08■■□□□ 1.13
RAPGEF1-206ENST00000438647 MYO9AB2RTY4 2548 aa22.08■■□□□ 1.12
RAPGEF1-206ENST00000438647 SULT2B1O00204 365 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 CASKO14936 926 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 PGM3O95394 542 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 ARAFP10398 606 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 ETS2P15036 469 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 DIO1P49895 249 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 COPZ1P61923 177 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms