RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 POU5F2Q8N7G0 328 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 GATSQ8NAP1 163 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 CEP70Q8NHQ1 597 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 SH3YL1Q96HL8 342 aaPredicted RBP9.29□□□□□ -0.92
RTN4-211ENST00000438462 DIRC2Q96SL1 478 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 EFCAB11Q9BUY7 163 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 FZR1Q9UM11 496 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
RTN4-211ENST00000438462 A0A1W2PPW3 197 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 DUS4LO95620 317 aaKnown RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 SERPING1P05155 500 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 APRTP07741 180 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 LINGO3P0C6S8 592 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 TMEM253P0C7T8 217 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 CTAGE8P0CG41 777 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 GP5P40197 560 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 UBE2NP61088 152 aaKnown RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 PRR5P85299 388 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 TEKQ02763 1124 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 SLC18A2Q05940 514 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 DDX39BQ13838 428 aaKnown RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 HIST2H2ACQ16777 129 aaPredicted RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 MMEL1Q495T6 779 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 GLIPR1L2Q4G1C9 344 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 PAGE2BQ5JRK9 111 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 CLEC6AQ6EIG7 209 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 HIST2H2AA3Q6FI13 130 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 C1orf122Q6ZSJ8 110 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 USP51Q70EK9 711 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 CTAGE4Q8IX94 777 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 PAPD5Q8NDF8 572 aaKnown RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 ACTRT2Q8TDY3 377 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 LRTOMTQ8WZ04 291 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 KRT35Q92764 455 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 WDR34Q96EX3 536 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 CENPKQ9BS16 269 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 ANP32EQ9BTT0 268 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 LSM4Q9Y4Z0 139 aaKnown RBP9.28□□□□□ -0.92
RTN4-211ENST00000438462 KMT2AQ03164 3969 aa9.28□□□□□ -0.92
RTN4-211ENST00000438462 SERTM1A2A2V5 107 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 KIF2AO00139 706 aaPredicted RBP9.27□□□□□ -0.93
RTN4-211ENST00000438462 NR5A2O00482 541 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 ZNF195O14628 629 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 TNFRSF13BO14836 293 aaPredicted RBP9.27□□□□□ -0.93
RTN4-211ENST00000438462 UTS2O95399 124 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 IGKV3-15P01624 115 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 VSIG10L2P0DP72 767 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 MED14OSP0DP75 135 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 CD28P10747 220 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 BSGP35613 385 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 FDFT1P37268 417 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 EIF1P41567 113 aaKnown RBP9.27□□□□□ -0.93
RTN4-211ENST00000438462 PGGT1BP53609 377 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 CDKN2DP55273 166 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 IL2P60568 153 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 LAPTM5Q13571 262 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 TSPO2Q5TGU0 170 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 FAM180BQ6P0A1 224 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 BTNL3Q6UXE8 466 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 HSCBQ8IWL3 235 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 WDR20Q8TBZ3 569 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 ISOC1Q96CN7 298 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 BBS4Q96RK4 519 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 CAPS2Q9BXY5 557 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 OSBPL8Q9BZF1 889 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 TAS2R13Q9NYV9 303 aa9.27□□□□□ -0.93
RTN4-211ENST00000438462 TANC2Q9HCD6 1990 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 SASH3O75995 380 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 HAUS5O94927 633 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 TGDSO95455 350 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 TGFBR2P37173 567 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 SLC6A9P48067 706 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 HNMTP50135 292 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 MMP16P51512 607 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 BPIFB3P59826 476 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 GNB2P62879 340 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 PSG6Q00889 435 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 ZNF155Q12901 538 aaPredicted RBP9.26□□□□□ -0.93
RTN4-211ENST00000438462 NFYCQ13952 458 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 PDK3Q15120 406 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 GRAMD1BQ3KR37 738 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 C11orf88Q6PI97 169 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 LRRN1Q6UXK5 716 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 COMTD1Q86VU5 262 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 MUC20Q8N307 709 aaPredicted RBP9.26□□□□□ -0.93
RTN4-211ENST00000438462 FBXO27Q8NI29 283 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 CDK15Q96Q40 435 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 RHOXF2Q9BQY4 288 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 DDX31Q9H8H2 851 aaKnown RBP9.26□□□□□ -0.93
RTN4-211ENST00000438462 RAB6BQ9NRW1 208 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.26□□□□□ -0.93
RTN4-211ENST00000438462 IL20RAQ9UHF4 553 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 VPREB3Q9UKI3 123 aa9.26□□□□□ -0.93
RTN4-211ENST00000438462 ZNF346Q9UL40 294 aaKnown RBP9.26□□□□□ -0.93
RTN4-211ENST00000438462 ARPC4-TTLL3A0A0A6YYG9 625 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 NPEPPSL1A6NEC2 478 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 LRRC10BA6NIK2 292 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms