RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OR2T7P0C7T2 308 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CCKBRP32239 447 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CRYBB2P43320 205 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TSFMP43897 325 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EPHA5P54756 1037 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PCBP3P57721 371 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CLDN2P57739 230 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 GPR50Q13585 617 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RAB11BQ15907 218 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF77Q15935 545 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TIGD3Q6B0B8 471 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CCSAPQ6IQ19 270 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SLC25A24Q6NUK1 477 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 KCTD9Q7L273 389 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CCDC71Q8IV32 467 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SPERTQ8NA61 448 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 GPR32P1Q8NGA4 272 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 OR2T27Q8NH04 317 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF417Q8TAU3 575 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 GPR148Q8TDV2 347 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PPP1R14AQ96A00 147 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 DNAJA3Q96EY1 480 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 KLHL15Q96M94 604 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CMKLR1Q99788 373 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM185BQ9H7F4 350 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EVA1AQ9H8M9 152 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EMC7Q9NPA0 242 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 WASH6PQ9NQA3 447 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PRSS16Q9NQE7 514 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NUP50Q9UKX7 468 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 MAN2B1O00754 1011 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EIF1AYO14602 144 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PHYHO14832 338 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 HOXC11O43248 304 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 LILRB3O75022 631 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RDH16O75452 317 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CTSLP07711 333 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RAB40ALP0C0E4 278 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 FBXO45P0C2W1 286 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 F3P13726 295 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CTGFP29279 349 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EVI2BP34910 448 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SOX18P35713 384 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RAP2BP61225 183 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 C1orf61Q13536 156 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 DEFB110Q30KQ9 67 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ALG10Q5BKT4 473 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SLC6A19Q695T7 634 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 FAAH2Q6GMR7 532 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM205Q6UW68 189 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 APOOLQ6UXV4 268 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ADGRF3Q8IZF5 1079 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 OR52R1Q8NGF1 315 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RNASE11Q8TAA1 199 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ZDHHC1Q8WTX9 485 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 RAB40AQ8WXH6 277 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 FGF13Q92913 245 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SCGB3A2Q96PL1 93 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 A4GNTQ9UNA3 340 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CAMK2AQ9UQM7 478 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 MEMO1Q9Y316 297 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NOX1Q9Y5S8 564 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PARP14Q460N5 1801 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ACOD1A6NK06 481 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 LCMT2O60294 686 aaKnown RBP6.21□□□□□ -1.41
CSDE1-205ENST00000438362 RLN2P04090 185 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 SBK2P0C263 348 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 PTPN6P29350 595 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 PKLRP30613 574 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 EIF1AXP47813 144 aaKnown RBP6.21□□□□□ -1.41
CSDE1-205ENST00000438362 RIDAP52758 137 aaKnown RBP6.21□□□□□ -1.41
CSDE1-205ENST00000438362 FGL1Q08830 312 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 FAM189A2Q15884 450 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 EOGTQ5NDL2 527 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 CD276Q5ZPR3 534 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 LRFN4Q6PJG9 635 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 SLC35F3Q8IY50 421 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 OR5J2Q8NH18 312 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 LGALS14Q8TCE9 139 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 NXPE3Q969Y0 559 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 CCDC120Q96HB5 630 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 LINC00615Q96LM1 132 aaPredicted RBP6.21□□□□□ -1.41
CSDE1-205ENST00000438362 MYADMQ96S97 322 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 TEAD3Q99594 435 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 HDAC8Q9BY41 377 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 SEC61A2Q9H9S3 476 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 TREM1Q9NP99 234 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 ATP13A2Q9NQ11 1180 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 DZANK1Q9NVP4 752 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 B3GNT2Q9NY97 397 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 FBXL3Q9UKT7 428 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 HCFC2Q9Y5Z7 792 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 DOCK3Q8IZD9 2030 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 BRWD3Q6RI45 1802 aa6.21□□□□□ -1.41
CSDE1-205ENST00000438362 TRABD2BA6NFA1 517 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 H7C2Y5 167 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SGK494L7N484 410 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 SSX4O60224 188 aa6.21□□□□□ -1.42
CSDE1-205ENST00000438362 FCMRO60667 390 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms