RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FGF11Q92914 225 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 MYDGFQ969H8 173 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 C3orf49Q96BT1 292 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 VMP1Q96GC9 406 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 HS6ST2Q96MM7 605 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 PTRH2Q9Y3E5 179 aaKnown RBP19.32■□□□□ 0.68
PTPRF-207ENST00000436724 TRAV27A0A087WT01 109 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 KLF7O75840 302 aaPredicted RBP19.32■□□□□ 0.68
PTPRF-207ENST00000436724 UMODP07911 640 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 ST13P50502 369 aaKnown RBP19.32■□□□□ 0.68
PTPRF-207ENST00000436724 PNLIPRP2P54317 469 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 SLC26A5P58743 744 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 SYT14P1Q58G82 188 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 TMEM201Q5SNT2 666 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF517Q6ZMY9 492 aaPredicted RBP19.32■□□□□ 0.68
PTPRF-207ENST00000436724 TMPRSS11FQ6ZWK6 438 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 CDK20Q8IZL9 346 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 STX19Q8N4C7 294 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 OR51A7Q8NH64 312 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 FANK1Q8TC84 345 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 LRFN5Q96NI6 719 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 HHATLQ9HCP6 504 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 AKIP1Q9NQ31 210 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 TMEM9BQ9NQ34 198 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 NPFFR2Q9Y5X5 522 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 PMF1-BGLAPU3KQ54 211 aa19.32■□□□□ 0.68
PTPRF-207ENST00000436724 EP300Q09472 2414 aaPredicted RBP19.31■□□□□ 0.68
PTPRF-207ENST00000436724 PCNX3Q9H6A9 2034 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 C4orf47A7E2U8 309 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 B4E171 279 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 CLDN25C9JDP6 229 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 LRRN3E7EW58 273 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 HCRTR2O43614 444 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 HNRNPCP07910 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
PTPRF-207ENST00000436724 OCM2P0CE71 109 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 OCMP0CE72 109 aaPredicted RBP19.31■□□□□ 0.68
PTPRF-207ENST00000436724 TSPAN7P41732 249 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 CTBP2P56545 445 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 MRGPREQ86SM8 312 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF440Q8IYI8 595 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 FAM26EQ8N5C1 309 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 DEPDC7Q96QD5 511 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 TBL1XR1Q9BZK7 514 aa19.31■□□□□ 0.68
PTPRF-207ENST00000436724 AKAP7Q9P0M2 348 aaPredicted RBP19.31■□□□□ 0.68
PTPRF-207ENST00000436724 OTOGLQ3ZCN5 2332 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 A0A087WUJ7 227 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 M0R3G1 203 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 NDUFB5O43674 189 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 SCO2O43819 266 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 SLC2A10O95528 541 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 SLC15A1P46059 708 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF846Q147U1 533 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 NCF4Q15080 339 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 DCAF12Q5T6F0 453 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 THSD4Q6ZMP0 1018 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 RAB11FIP2Q7L804 512 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 DYNC2LI1Q8TCX1 351 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 TP53INP1Q96A56 240 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 Q96MT0 163 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 UBQLN3Q9H347 655 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 SIGLEC7Q9Y286 467 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 EFCAB9A8MZ26 197 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 ALG1L2C9J202 215 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 EVI2BP34910 448 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 TGFBR2P37173 567 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 RBM34P42696 430 aaKnown RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 NRG3P56975 720 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 FBXW4P57775 412 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 NCS1P62166 190 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 ATP1A4Q13733 1029 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 OCLNQ16625 522 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 ISXQ2M1V0 245 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 PGGHGQ32M88 737 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 OR2T33Q8NG76 320 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 WDR36Q8NI36 951 aaKnown RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 TMEM163Q8TC26 289 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 DNAJA4Q8WW22 397 aaPredicted RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 OIT3Q8WWZ8 545 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF582Q96NG8 517 aaPredicted RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 EXOSC3Q9NQT5 275 aaKnown RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 C19orf25Q9UFG5 118 aaPredicted RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 PISDQ9UG56 409 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 NXT1Q9UKK6 140 aaKnown RBP19.3■□□□□ 0.68
PTPRF-207ENST00000436724 TMEM5Q9Y2B1 443 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 MPDZO75970 2070 aa19.3■□□□□ 0.68
PTPRF-207ENST00000436724 C9J4A7 227 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 STK17BO94768 372 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF91Q05481 1191 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 DBPQ10586 325 aaPredicted RBP19.29■□□□□ 0.68
PTPRF-207ENST00000436724 TOMM34Q15785 309 aaPredicted RBP19.29■□□□□ 0.68
PTPRF-207ENST00000436724 UBE2UQ5VVX9 321 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 NUBPLQ8TB37 319 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 RPL3LQ92901 407 aaKnown RBP19.29■□□□□ 0.68
PTPRF-207ENST00000436724 SLC38A2Q96QD8 506 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 OR6C70A6NIJ9 312 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 SURF4O15260 269 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 FADS1O60427 444 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 NADKO95544 446 aaPredicted RBP19.29■□□□□ 0.68
PTPRF-207ENST00000436724 DBTP11182 482 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms