RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 CLDN22Q8N7P3 220 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 OR2M3Q8NG83 312 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 KCNE4Q8WWG9 221 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 TMEM41AQ96HV5 264 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 GPA33Q99795 319 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 RNF32Q9H0A6 362 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 RIBC2Q9H4K1 309 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
TMEM40-204ENST00000435218 BCKDKO14874 412 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 SNPHO15079 494 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 TACR3P29371 465 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 PLA2G5P39877 138 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 CASRP41180 1078 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 MAP2K6P52564 334 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 CRISP1P54107 249 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 PDK3Q15120 406 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 TOMM34Q15785 309 aaPredicted RBP13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF691Q5VV52 312 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 RASSF6Q6ZTQ3 369 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 CDK20Q8IZL9 346 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 WDSUB1Q8N9V3 476 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 PSD4Q8NDX1 1056 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 BPIFA2Q96DR5 249 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 FAM46AQ96IP4 442 aaKnown RBP13.72□□□□□ -0.21
TMEM40-204ENST00000435218 CNBD2Q96M20 576 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 ING2Q9H160 280 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 SACM1LQ9NTJ5 587 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
TMEM40-204ENST00000435218 SPTBN2O15020 2390 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 C2orf72A6NCS6 295 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 TLX3O43711 291 aaPredicted RBP13.71□□□□□ -0.21
TMEM40-204ENST00000435218 P04436 131 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 PRKCAP17252 672 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 SPINK2P20155 84 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 CHMP24386 653 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 EPHA2P29317 976 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 POLR2HP52434 150 aaKnown RBP13.71□□□□□ -0.21
TMEM40-204ENST00000435218 TUBA3CQ13748 450 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 PRAMEF20Q5VT98 475 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 AGAP7PQ5VUJ5 663 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 TUBA3EQ6PEY2 450 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 MDGA2Q7Z553 956 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 PLCZ1Q86YW0 608 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
TMEM40-204ENST00000435218 SETD9Q8NE22 299 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 PFN4Q8NHR9 129 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 MUS81Q96NY9 551 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 AGAP4Q96P64 663 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 UTP23Q9BRU9 249 aaKnown RBP13.71□□□□□ -0.21
TMEM40-204ENST00000435218 DSN1Q9H410 356 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 PTGES2Q9H7Z7 377 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 C20orf141Q9NUB4 165 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 IL20Q9NYY1 176 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 MED11Q9P086 117 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 HRH3Q9Y5N1 445 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 KIAA1549Q9HCM3 1950 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 CNTRLQ7Z7A1 2325 aa13.71□□□□□ -0.21
TMEM40-204ENST00000435218 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 ZAR1LA6NP61 321 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 TRIM3O75382 744 aaPredicted RBP13.7□□□□□ -0.22
TMEM40-204ENST00000435218 NEURL1O76050 574 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 CLIC3O95833 236 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 PRKAR1AP10644 381 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 IFI30P13284 250 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 GGT2P36268 569 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 CD96P40200 585 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 APOBEC1P41238 236 aaKnown RBP13.7□□□□□ -0.22
TMEM40-204ENST00000435218 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
TMEM40-204ENST00000435218 MFAP5Q13361 173 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 PTGES3Q15185 160 aaKnown RBP13.7□□□□□ -0.22
TMEM40-204ENST00000435218 PLPPR5Q32ZL2 321 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 OR5M10Q6IEU7 315 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 RPL13AP3Q6NVV1 102 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 UGT2A3Q6UWM9 527 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 C1GALT1C1Q96EU7 318 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 MRGPRX4Q96LA9 322 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 APOL4Q9BPW4 351 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 TIMMDC1Q9NPL8 285 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 PNPLA3Q9NST1 481 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 MED17Q9NVC6 651 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 LRFN1Q9P244 771 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 GMPPBQ9Y5P6 360 aa13.7□□□□□ -0.22
TMEM40-204ENST00000435218 TNRC6AQ8NDV7 1962 aaKnown RBP13.7□□□□□ -0.22
TMEM40-204ENST00000435218 A0A087WZY1 265 aa13.69□□□□□ -0.22
TMEM40-204ENST00000435218 CDC42EP2O14613 210 aa13.69□□□□□ -0.22
TMEM40-204ENST00000435218 MAKP20794 623 aa13.69□□□□□ -0.22
TMEM40-204ENST00000435218 CXCR1P25024 350 aa13.69□□□□□ -0.22
TMEM40-204ENST00000435218 ADH6P28332 368 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms