RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ELK1P19419 428 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SSTR4P31391 388 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 GALNSP34059 522 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 NKX2-5P52952 324 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 CLDN20P56880 219 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 RAB25P57735 213 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 MRPS15P82914 257 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 PSG6Q00889 435 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 IFITM2Q01629 132 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 PLAURQ03405 335 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CRYZQ08257 329 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 FZD2Q14332 565 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 GGTLC2Q14390 218 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ISXQ2M1V0 245 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SLC35D3Q5M8T2 416 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 TIGD3Q6B0B8 471 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 B3GLCTQ6Y288 498 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 DGAT2L6Q6ZPD8 337 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 TRILQ7L0X0 811 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CEACAM19Q7Z692 300 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 PXKQ7Z7A4 578 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ZAR1Q86SH2 424 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 FAM98AQ8NCA5 519 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 OR2T27Q8NH04 317 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 HMGB4Q8WW32 186 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 TCTN2Q96GX1 697 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 C4orf36Q96KX1 117 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 VSTM2LQ96N03 204 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ERMAPQ96PL5 475 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 KCNJ15Q99712 375 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 TCEAL2Q9H3H9 227 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 ERVMER34-1Q9H9K5 563 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CAPN10Q9HC96 672 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 MCCC2Q9HCC0 563 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ENAMQ9NRM1 1142 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 STARD5Q9NSY2 213 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SCN3AQ9NY46 2000 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 RABL2AQ9UBK7 228 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 MALT1Q9UDY8 824 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 RABL2BQ9UNT1 228 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 NPFFR2Q9Y5X5 522 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 TRAV1-2A0A0B4J238 106 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ANKRD61A6NGH8 418 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 OGG1O15527 345 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 RFPL3O75679 317 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ARL6IP5O75915 188 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 NSA2O95478 260 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 IGF2P01344 180 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 IGKV1D-16P01601 117 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CSF2P04141 144 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 MRPL3P09001 348 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 NPR2P20594 1047 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SHC1P29353 583 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 HSF2Q03933 536 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CSTF1Q05048 431 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 SLC3A1Q07837 685 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 COL9A2Q14055 689 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 FAM53BQ14153 422 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 P2RY14Q15391 338 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SF3B4Q15427 424 aaKnown RBP eCLIP9.6□□□□□ -0.87
CD44-210ENST00000434472 TMEM31Q5JXX7 168 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 BICRALQ6AI39 1079 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 PYHIN1Q6K0P9 492 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 BAIAP2L2Q6UXY1 529 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 DPY19L2P2Q6ZN68 376 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 NOXA1Q86UR1 476 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CADM2Q8N3J6 435 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 PHYHIPQ92561 330 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 KLHDC7BQ96G42 594 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 PTCHD1Q96NR3 888 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CNN2Q99439 309 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 SLC19A3Q9BZV2 496 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 HDHD2Q9H0R4 259 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 UCK1Q9HA47 277 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 FAM60AQ9NP50 221 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 RPRD1BQ9NQG5 326 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 PRODH2Q9UF12 536 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 CHRNA9Q9UGM1 479 aa9.6□□□□□ -0.87
CD44-210ENST00000434472 NUFIP1Q9UHK0 495 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 RBMX2Q9Y388 322 aaKnown RBP9.6□□□□□ -0.87
CD44-210ENST00000434472 A0A0A6YYC8 382 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 SYNDIG1LA6NDD5 238 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SERINC4A6NH21 518 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SLC9B1P1A6NJY1 282 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 A8MU76 341 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 I3L1I5 382 aaPredicted RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 ZNF749O43361 778 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 SC5DO75845 299 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 GATBO75879 557 aaKnown RBP9.59□□□□□ -0.87
CD44-210ENST00000434472 CSTAP01040 98 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 PSKH1P11801 424 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 TYRP1P17643 537 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 RAB3BP20337 219 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 PITPNBP48739 271 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 HSD17B7P56937 341 aa9.59□□□□□ -0.87
CD44-210ENST00000434472 BTG1P62324 171 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms