RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 C1QBP02746 253 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 HOXC4P09017 264 aaPredicted RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 PEPDP12955 493 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 NPR2P20594 1047 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 DRD5P21918 477 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 RBMS1P29558 406 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 MAP3K8P41279 467 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 SRP9P49458 86 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 EMDP50402 254 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 PXKQ7Z7A4 578 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 SYT9Q86SS6 491 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 LIX1LQ8IVB5 337 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 OR52R1Q8NGF1 315 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 ELSPBP1Q96BH3 223 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 ZNF559Q9BR84 538 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 A0A0B4J203 849 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 HCRTR1O43613 425 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 CHP2O43745 196 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 FZD7O75084 574 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 SC5DO75845 299 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 PRKCAP17252 672 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 HK1P19367 917 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 VSX2P58304 361 aaPredicted RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 SRP54P61011 504 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 CRYZQ08257 329 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 SRSF5Q13243 272 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 PLA1AQ53H76 456 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 BCL2L15Q5TBC7 163 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 ZCCHC12Q6PEW1 402 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 RTL4Q6ZR62 310 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 TPRA1Q86W33 373 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 GHDCQ8N2G8 530 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 OR4N2Q8NGD1 307 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 GRPEL2Q8TAA5 225 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 AKAP1Q92667 903 aaKnown RBP eCLIP10.89□□□□□ -0.67
CD44-209ENST00000433892 ZMYND19Q96E35 227 aaPredicted RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 RBCK1Q9BYM8 510 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 MTIF3Q9H2K0 278 aaKnown RBP10.89□□□□□ -0.67
CD44-209ENST00000433892 MCCC2Q9HCC0 563 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 PRUNE2Q8WUY3 3088 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 LAMA1P25391 3075 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 GALR3O60755 368 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 ZNF780AO75290 641 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 APBB3O95704 486 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 CBX7O95931 251 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 AK1P00568 194 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 EGFP01133 1207 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 CD53P19397 219 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 AHCYP23526 432 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 NRG3P56975 720 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 TAS2R43P59537 309 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 PPP1CAP62136 330 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 TNK1Q13470 666 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 FHL1Q13642 323 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 TRAM1Q15629 374 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ALG11Q2TAA5 492 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 ALG10BQ5I7T1 473 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 DMKNQ6E0U4 476 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 NANOGNBQ7Z5D8 188 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ZNF761Q86XN6 746 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 CA13Q8N1Q1 262 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 CSNK1A1LQ8N752 337 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 OR52E2Q8NGJ4 325 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 OR5H6Q8NGV6 325 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 DEDD2Q8WXF8 326 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ANKRD9Q96BM1 317 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 CTHRC1Q96CG8 243 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ERMAPQ96PL5 475 aaPredicted RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 GON7Q9BXV9 100 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
CD44-209ENST00000433892 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 C14orf105Q9NVL8 296 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 HRASLS2Q9NWW9 162 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 NCKAP1Q9Y2A7 1128 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 FANCMQ8IYD8 2048 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 TRAV6A0A075B6T7 132 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 C2orf74A8MZ97 194 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 ARHGEF9O43307 516 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 OR10H2O60403 315 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 RDH16O75452 317 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 SOX30O94993 753 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 NKX2-2O95096 273 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 IGKV1D-16P01601 117 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 CTSBP07858 339 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 RAB3BP20337 219 aa10.88□□□□□ -0.67
CD44-209ENST00000433892 SLC6A6P31641 620 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms